Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01576 ATGGGTAACTGCCTAGATTCTTCTGCAAAAGTTGATGCAGCTCAAAGCTCCAGATCCACTTCTGGAATCTCAAAAACCACTCCTTCCAGCTTATCTATTCCATCATACAGTGAAAAAAGCAATGCCTCAACTCTTCCCACACCAAGGTCTGAGGGTGAGATCTTGTCTTCACCCAATCTCAAGCCCTTCACATTCAATGAACTGAAGAATGCCACCAGAAATTTTCGTCCTGATAGTCTTCTTGGTGAAGGGGGATTTGGTCATGTTTATAAGGGATGGATAGATGAACACACATTTACAGCTTCAAAACCTGGATCAGGAATGGTTGTTGCTGTAAAGAGGCTTAAGCCTGAAGGTTTTCAAGGTCATAAGGAGTGGTTGACTGAGGTTAACTACCTTGGACAACTGCACCATCCTAATCTAGTTAAATTAATTGGGTACTGCTTGGAGGGAGATAATCGGCTATTGGTCTATGAGTTTATGCCCAAAGGGAGCTTAGAGAACCATCTGTTTAGAAGAGGACCACAACCACTCTCATGGGCAGTGAGAATGAAAGTGGCCATTGGTGCTGCCAGAGGACTCTCTTTTCTTCACAATGCCAAATCACAAGTCATATACCGGGATTTTAAAGCTTCTAACATCCTTCTGGATGCTGTAAGATCAATGAGAATTGTTACTATTTGTGTACACTGCTTACTTATCATGCCATTGGGATTGCAGGAGTTCAATGCTAAACTCTCTGATTTTGGATTAGCTAAGGCAGGTCCTACTGGTGATAGAACTCATGTGTCTACTCAAGTCATGGGTACTCACGGATATGCAGCACCTGAATATGTTGCAACTGGTCGGTTAACAGCCAAAAGTGATGTATACAGTTTTGGGGTTGTGTTGCTTGAACTTTTGTCTGGAAGACGAGCTGTTGATAAAACAATAACTGGTTTGGAGCAGAATCTGGTGGACTGGGCAAAACCATATTTGGGCGATAAACGAAGACTATTCCGGATAATGGATTCCAAATTGGAAGGCCAATACCCACAAAAAGGAGCCTTCATGGCTGCTACACTTGCTCTACAATGCCTTAACAGTGAAGCCAAGGCAAGGCCTCCAATGACAGAGGTGTTAGCAACTCTGGAACAGATAGAAGCCCCTAAAAGTGCAGGCAGGAATTCCCTATCAGAACATCAGAGAATCCACACTCCTGTAAGAAGGTCTCCAGCGCGAAACAGGACCCCTTTAAGTCTAACTCCTACTGCATCCCCTCTGCCATCTCACCGGCAATCCCCTCGTGTCAGTGTGCACTAA 1302 0.4424 MGNCLDSSAKVDAAQSSRSTSGISKTTPSSLSIPSYSEKSNASTLPTPRSEGEILSSPNLKPFTFNELKNATRNFRPDSLLGEGGFGHVYKGWIDEHTFTASKPGSGMVVAVKRLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGDNRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAVRSMRIVTICVHCLLIMPLGLQEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKTITGLEQNLVDWAKPYLGDKRRLFRIMDSKLEGQYPQKGAFMAATLALQCLNSEAKARPPMTEVLATLEQIEAPKSAGRNSLSEHQRIHTPVRRSPARNRTPLSLTPTASPLPSHRQSPRVSVH. 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01576 433 MobiDBLite consensus disorder prediction 1 58 - -
Seca9g01576 433 Gene3D Transferase(Phosphotransferase) domain 1 161 401 - -
Seca9g01576 433 FunFam Serine/threonine-protein kinase BIK1 42 160 - -
Seca9g01576 433 CDD STKc_IRAK 81 380 - -
Seca9g01576 433 MobiDBLite consensus disorder prediction 9 58 - -
Seca9g01576 433 MobiDBLite consensus disorder prediction 384 433 - -
Seca9g01576 433 PANTHER OS01G0588500 PROTEIN-RELATED 36 381 - -
Seca9g01576 433 ProSiteProfiles Protein kinase domain profile. 75 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01576 433 Pfam Protein tyrosine and serine/threonine kinase 79 376 IPR001245 GO:0004672|GO:0006468
Seca9g01576 433 ProSitePatterns Protein kinases ATP-binding region signature. 81 113 IPR017441 GO:0005524
Seca9g01576 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Seca9g01576 433 MobiDBLite consensus disorder prediction 406 433 - -
Seca9g01576 433 SUPERFAMILY Protein kinase-like (PK-like) 53 380 IPR011009 -
Seca9g01576 433 Gene3D Phosphorylase Kinase; domain 1 51 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01576 Seca-Chr9 26529438 26533177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01576 51 377 Glycoside Hydrolase AT3G07070 50.303 1.33e-107 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Seca9g01576 PK_Tyr_Ser-Thr 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01576 - - gmx:100809778 756.903