Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g01576 | ATGGGTAACTGCCTAGATTCTTCTGCAAAAGTTGATGCAGCTCAAAGCTCCAGATCCACTTCTGGAATCTCAAAAACCACTCCTTCCAGCTTATCTATTCCATCATACAGTGAAAAAAGCAATGCCTCAACTCTTCCCACACCAAGGTCTGAGGGTGAGATCTTGTCTTCACCCAATCTCAAGCCCTTCACATTCAATGAACTGAAGAATGCCACCAGAAATTTTCGTCCTGATAGTCTTCTTGGTGAAGGGGGATTTGGTCATGTTTATAAGGGATGGATAGATGAACACACATTTACAGCTTCAAAACCTGGATCAGGAATGGTTGTTGCTGTAAAGAGGCTTAAGCCTGAAGGTTTTCAAGGTCATAAGGAGTGGTTGACTGAGGTTAACTACCTTGGACAACTGCACCATCCTAATCTAGTTAAATTAATTGGGTACTGCTTGGAGGGAGATAATCGGCTATTGGTCTATGAGTTTATGCCCAAAGGGAGCTTAGAGAACCATCTGTTTAGAAGAGGACCACAACCACTCTCATGGGCAGTGAGAATGAAAGTGGCCATTGGTGCTGCCAGAGGACTCTCTTTTCTTCACAATGCCAAATCACAAGTCATATACCGGGATTTTAAAGCTTCTAACATCCTTCTGGATGCTGTAAGATCAATGAGAATTGTTACTATTTGTGTACACTGCTTACTTATCATGCCATTGGGATTGCAGGAGTTCAATGCTAAACTCTCTGATTTTGGATTAGCTAAGGCAGGTCCTACTGGTGATAGAACTCATGTGTCTACTCAAGTCATGGGTACTCACGGATATGCAGCACCTGAATATGTTGCAACTGGTCGGTTAACAGCCAAAAGTGATGTATACAGTTTTGGGGTTGTGTTGCTTGAACTTTTGTCTGGAAGACGAGCTGTTGATAAAACAATAACTGGTTTGGAGCAGAATCTGGTGGACTGGGCAAAACCATATTTGGGCGATAAACGAAGACTATTCCGGATAATGGATTCCAAATTGGAAGGCCAATACCCACAAAAAGGAGCCTTCATGGCTGCTACACTTGCTCTACAATGCCTTAACAGTGAAGCCAAGGCAAGGCCTCCAATGACAGAGGTGTTAGCAACTCTGGAACAGATAGAAGCCCCTAAAAGTGCAGGCAGGAATTCCCTATCAGAACATCAGAGAATCCACACTCCTGTAAGAAGGTCTCCAGCGCGAAACAGGACCCCTTTAAGTCTAACTCCTACTGCATCCCCTCTGCCATCTCACCGGCAATCCCCTCGTGTCAGTGTGCACTAA | 1302 | 0.4424 | MGNCLDSSAKVDAAQSSRSTSGISKTTPSSLSIPSYSEKSNASTLPTPRSEGEILSSPNLKPFTFNELKNATRNFRPDSLLGEGGFGHVYKGWIDEHTFTASKPGSGMVVAVKRLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGDNRLLVYEFMPKGSLENHLFRRGPQPLSWAVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDAVRSMRIVTICVHCLLIMPLGLQEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKTITGLEQNLVDWAKPYLGDKRRLFRIMDSKLEGQYPQKGAFMAATLALQCLNSEAKARPPMTEVLATLEQIEAPKSAGRNSLSEHQRIHTPVRRSPARNRTPLSLTPTASPLPSHRQSPRVSVH. | 434 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g01576 | 433 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
Seca9g01576 | 433 | Gene3D | Transferase(Phosphotransferase) domain 1 | 161 | 401 | - | - | |
Seca9g01576 | 433 | FunFam | Serine/threonine-protein kinase BIK1 | 42 | 160 | - | - | |
Seca9g01576 | 433 | CDD | STKc_IRAK | 81 | 380 | - | - | |
Seca9g01576 | 433 | MobiDBLite | consensus disorder prediction | 9 | 58 | - | - | |
Seca9g01576 | 433 | MobiDBLite | consensus disorder prediction | 384 | 433 | - | - | |
Seca9g01576 | 433 | PANTHER | OS01G0588500 PROTEIN-RELATED | 36 | 381 | - | - | |
Seca9g01576 | 433 | ProSiteProfiles | Protein kinase domain profile. | 75 | 380 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca9g01576 | 433 | Pfam | Protein tyrosine and serine/threonine kinase | 79 | 376 | IPR001245 | GO:0004672|GO:0006468 | |
Seca9g01576 | 433 | ProSitePatterns | Protein kinases ATP-binding region signature. | 81 | 113 | IPR017441 | GO:0005524 | |
Seca9g01576 | 433 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 204 | 216 | IPR008271 | GO:0004672|GO:0006468 | |
Seca9g01576 | 433 | MobiDBLite | consensus disorder prediction | 406 | 433 | - | - | |
Seca9g01576 | 433 | SUPERFAMILY | Protein kinase-like (PK-like) | 53 | 380 | IPR011009 | - | |
Seca9g01576 | 433 | Gene3D | Phosphorylase Kinase; domain 1 | 51 | 160 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g01576 | Seca-Chr9 | 26529438 | 26533177 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca9g01576 | 51 | 377 | Glycoside Hydrolase | AT3G07070 | 50.303 | 1.33e-107 | 322 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VI | Seca9g01576 | PK_Tyr_Ser-Thr | 1.4e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g01576 | - | - | gmx:100809778 | 756.903 |