Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01561 ATGTTGTCTTGGAAAATATCAGATAAGGTTCTGGACAGAGGGGCAAAGATAGACCTTCTAGTGGACAGAGCTGAGAGCCTTCATCACCAGGTAAAATACACACTTTCAGATTTTAGCATAATGGTGTTGTATCCTTTTCTATTTCTAAATTTCCCTAGTCTGAAGTATCTAGTGCATTCCAAGTTGTTACTGATCACTTTCTTGGTTTTTGAGTTAATTGCTTTTGCATTGGCAGTGGCTGCAGAGCATGAGGCTAAACTTGTAGAACTTGAGGCTGAGCTAGTGGATATCAATACAAATAATTGGAAGTTGCAACACTCCTACAATGATCTATCAGAGGTGGAGCAGAGAAAGTTATTATTTCAGCCCAGTAAAGATCCCCCCATATTTGTGGTTAGTGTTAACGAAAAGGAAAGGGCGTGCCCTCTACATCTTGCAGAAGCTCTAGAATACTGCACAAGCAAAGGGCGTGCTCTCTATCATGACCTTAATACATTGGGGCATTTGGCTCTAGCAAAAGCAAATCAGAGGTAA 534 0.4082 MLSWKISDKVLDRGAKIDLLVDRAESLHHQVKYTLSDFSIMVLYPFLFLNFPSLKYLVHSKLLLITFLVFELIAFALAVAAEHEAKLVELEAELVDINTNNWKLQHSYNDLSEVEQRKLLFQPSKDPPIFVVSVNEKERACPLHLAEALEYCTSKGRALYHDLNTLGHLALAKANQR. 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01561 177 Coils Coil 73 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01561 Seca-Chr9 26322551 26326517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01561 84 126 Primary Pumps ATPases(2) AT4G39080 58.140 5.32e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01561 K14500 - han:110900380 50.8322