Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01536 ATGGACGAGAAAACTAGCGAAGTTGTGTTGCTCGGGTCATGGGTAAGCTCTTACTGCACCAGGATTGAGCTAGCCCTTAAACTGAAGGGCATACCATACAAATTCGTGGAGGAAGACCTGAAAAACAAAAGTGATTTACTCCTCCAAAATAACCCTGTCCACAAAAAGATTCCAGTGCTCTTGCACAAAGGAAAGCCAATTTGTGAGTCACTCATCATTCTTGAATACATCGATGAGGTCTGGAGCCACAGTCCCAAACTGTTGCCAGAGGATCCTTATCAGAGGGCCAAAGTCCGTTTTTGGGCCAACTACCATGACCAGAAAATTTCGCCTGGTATCTACCCCATCCTCCTATCAAAAGGGGAAGAGAGAAAGAAAGCAATTGAAGAGATGGATGAGATGGTGAAGGTATTTGAAGAACGGGTGAAGGAGGGTTTAGATGGGCAATTCCCTTTGTACAAAGGTGAAACATTAGGATTCCTTGACATTGTGGTAGGTGCAGGTTCTTGCAACTATGAAGCATTTAACGAGGCCTGTAACATAGAGGTCACAACCCCCCAAAAGAGCCCCAAGTTTTTCGAGTGGGTGAATGACATGAAGGAACATCCTCTGATGAAAGAGACACTGCCTCCTCATGACAAGTTGGTCGCCACGATAAAAAATATCATATCATCCCCTAAAGTGTGA 687 0.4469 MDEKTSEVVLLGSWVSSYCTRIELALKLKGIPYKFVEEDLKNKSDLLLQNNPVHKKIPVLLHKGKPICESLIILEYIDEVWSHSPKLLPEDPYQRAKVRFWANYHDQKISPGIYPILLSKGEERKKAIEEMDEMVKVFEERVKEGLDGQFPLYKGETLGFLDIVVGAGSCNYEAFNEACNIEVTTPQKSPKFFEWVNDMKEHPLMKETLPPHDKLVATIKNIISSPKV. 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01536 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 215 IPR045073 -
Seca9g01536 228 CDD GST_N_Tau 8 81 - -
Seca9g01536 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 228 IPR010987 -
Seca9g01536 228 Pfam Glutathione S-transferase, N-terminal domain 12 79 IPR004045 -
Seca9g01536 228 SUPERFAMILY GST C-terminal domain-like 79 222 IPR036282 -
Seca9g01536 228 FunFam Tau class glutathione S-transferase 1 89 - -
Seca9g01536 228 SFLD Glutathione Transferase (cytosolic) 4 222 IPR040079 -
Seca9g01536 228 CDD GST_C_Tau 92 220 IPR045074 GO:0004364|GO:0006749
Seca9g01536 228 FunFam Glutathione S-transferase U9 88 227 - -
Seca9g01536 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Seca9g01536 228 SFLD Main.3: Omega- and Tau-like 4 222 IPR045073 -
Seca9g01536 228 Gene3D - 88 227 - -
Seca9g01536 228 Gene3D Glutaredoxin 1 87 - -
Seca9g01536 228 SUPERFAMILY Thioredoxin-like 8 109 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01536 Seca-Chr9 26009637 26010682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01536 1 220 Glutathione S-transferase Gene Family AT1G74590 44.395 1.13e-70 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01536 K00799 - vvi:100263691 301.597