LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca9g01536	ATGGACGAGAAAACTAGCGAAGTTGTGTTGCTCGGGTCATGGGTAAGCTCTTACTGCACCAGGATTGAGCTAGCCCTTAAACTGAAGGGCATACCATACAAATTCGTGGAGGAAGACCTGAAAAACAAAAGTGATTTACTCCTCCAAAATAACCCTGTCCACAAAAAGATTCCAGTGCTCTTGCACAAAGGAAAGCCAATTTGTGAGTCACTCATCATTCTTGAATACATCGATGAGGTCTGGAGCCACAGTCCCAAACTGTTGCCAGAGGATCCTTATCAGAGGGCCAAAGTCCGTTTTTGGGCCAACTACCATGACCAGAAAATTTCGCCTGGTATCTACCCCATCCTCCTATCAAAAGGGGAAGAGAGAAAGAAAGCAATTGAAGAGATGGATGAGATGGTGAAGGTATTTGAAGAACGGGTGAAGGAGGGTTTAGATGGGCAATTCCCTTTGTACAAAGGTGAAACATTAGGATTCCTTGACATTGTGGTAGGTGCAGGTTCTTGCAACTATGAAGCATTTAACGAGGCCTGTAACATAGAGGTCACAACCCCCCAAAAGAGCCCCAAGTTTTTCGAGTGGGTGAATGACATGAAGGAACATCCTCTGATGAAAGAGACACTGCCTCCTCATGACAAGTTGGTCGCCACGATAAAAAATATCATATCATCCCCTAAAGTGTGA	687	0.4469	MDEKTSEVVLLGSWVSSYCTRIELALKLKGIPYKFVEEDLKNKSDLLLQNNPVHKKIPVLLHKGKPICESLIILEYIDEVWSHSPKLLPEDPYQRAKVRFWANYHDQKISPGIYPILLSKGEERKKAIEEMDEMVKVFEERVKEGLDGQFPLYKGETLGFLDIVVGAGSCNYEAFNEACNIEVTTPQKSPKFFEWVNDMKEHPLMKETLPPHDKLVATIKNIISSPKV.	229

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca9g01536	228	PANTHER	GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING	11	215	IPR045073	-
	Seca9g01536	228	CDD	GST_N_Tau	8	81	-	-
	Seca9g01536	228	ProSiteProfiles	Soluble glutathione S-transferase C-terminal domain profile.	91	228	IPR010987	-
	Seca9g01536	228	Pfam	Glutathione S-transferase, N-terminal domain	12	79	IPR004045	-
	Seca9g01536	228	SUPERFAMILY	GST C-terminal domain-like	79	222	IPR036282	-
	Seca9g01536	228	FunFam	Tau class glutathione S-transferase	1	89	-	-
	Seca9g01536	228	SFLD	Glutathione Transferase (cytosolic)	4	222	IPR040079	-
	Seca9g01536	228	CDD	GST_C_Tau	92	220	IPR045074	GO:0004364\|GO:0006749
	Seca9g01536	228	FunFam	Glutathione S-transferase U9	88	227	-	-
	Seca9g01536	228	ProSiteProfiles	Soluble glutathione S-transferase N-terminal domain profile.	6	85	IPR004045	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca9g01536	Seca-Chr9	26009637	26010682	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca9g01536	1	220	Glutathione S-transferase Gene Family	AT1G74590	44.395	1.13e-70	214

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca9g01536	K00799		-	vvi:100263691	301.597

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