Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01533 ATGCATGACCTTATAGAGGGTACGGGTAGAGAAATTGTACGGCAAGAATCACTGGGAGTAGATTATGGCTCTAAAAATATTCTTCATGTTTTGAAAGAGAACAAGGGATCTGATAAATTTGACATCATCATGCTACATCTGCTCAAAGATAAAGAAGTTCAATGGGGGGATGGAAATGCATTAAAGAAGATGGAAAGCCTCAAAATACTGGTCATTGAAAATGCTCGGTTTTCCAGAGGACCTAATCATCTCCCAAGAAGTTTAAGAGTGCTAAAATGGCGCGGATATCCTGAATCGTCATCACTGCCAGTTCATTTTGATCCAAAGAAACTAGTCATACTTGACTTGTCCATGAGTTACTTTACATTCGAAAATCAACTGATCAATGTATAG 393 0.3817 MHDLIEGTGREIVRQESLGVDYGSKNILHVLKENKGSDKFDIIMLHLLKDKEVQWGDGNALKKMESLKILVIENARFSRGPNHLPRSLRVLKWRGYPESSSLPVHFDPKKLVILDLSMSYFTFENQLINV. 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01533 130 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 120 IPR044974 GO:0006952
Seca9g01533 130 SUPERFAMILY L domain-like 51 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01533 Seca-Chr9 25987311 25987856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01533 1 119 WRKY Transcription Factor Family AT4G12020 35.036 9.25e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01533 - - mtr:11412787 172.17