Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01522 ATGGAGAGCCATGGCCAAGTCCAAGTTCCAGAAGGAACCTCCTTTCTGAAAACCTATTTCAATGGACTCAACGCCTTGTTAGGTCTTGGAGTACTCTCTGTACCGTATGCCTTATCTCAAGGGGGATGGTTGAGTTTAATGTTGCACATTTTTGTGGCAATTAGTTGTTGGTACACAGGGTTACTTCTCCAAAGGTGTGTGAATAAACATCCACAAATCAAGTCCTACTCTGACATAGGTAACGTTGCTTTTGGCTACAAGGGAAGAGTTGTGGTAGCTATTTTCATGTATTTAGATCTCTATTTAGTTGCCGTAGAGCTTCTTACACTAGGAGGTGACAGTTTACAATACATGTTTCCAAACTTGAACTTCAAAATTGCTACTCTTAGCATTAAAGGTGATATAGGTTTTATTTTGCTTACTGCTTTGGCAATATTGCCAACAACATGGTTGAGAAGTTTTGGAGCTCTGGCCTACATTTCTGCTAGTGGGGTATTGGTTTGTCTAATTTTGATATGGTGTGTTCTATGGGCGGGTGCAGTTGATGGTGTGGGGTTTCATGAAAAAGGCCAGCTAATGAATCTGAGAGGATTTCCTGCTGCTTTAAGCATATTTAATTTCTGTTACAGTGCTCATGCAGTCTTCCCCACTCTCAGCTATTCCATGAGAGATAAGAGACAATTTGATAAGGTTTTACTATATTGCTTTGTTACAAGCACCACAGGCTATGGGTTGATGTCAATTATAGGTTACTTGATGTTTGGAAATTATTCCAAGTCTCAAGTGATCTTAAATCTTCCAATGAATAAAATAAACACCAATATAGCTATTTATACTTCATTATTCGTCCCCTTCACCAAGTATGCAATTATGGTCACTCCTATTGCCATTGCCATTGAGGACAAGTTGCATTCCAACAGCAAATTTTCTAGTGTTCTCATTAGAACAATGATTGTGGTCAGTACTACGCTTGTGGCAATATTTGTTCCCTATTTTGGGTATGTGATGATGCTTATTGGTGCTTTATCAGGTGTTGCAATGGCATTTTTGTTGCCTTGCTTGTGTTACCTAAAAATAAATGTAGCTGCAAGAAAATTTGGGTTAGAGTTTATGGTTATTGTGGGAATTATATTAGCAGGATCACTCATTTGTGTATTTGGCTCTTATATTTCTATAAGCGAGATAGTGTATCGATGGAAAAGAGAAAAGTTCATTAATTAA 1221 0.38 MESHGQVQVPEGTSFLKTYFNGLNALLGLGVLSVPYALSQGGWLSLMLHIFVAISCWYTGLLLQRCVNKHPQIKSYSDIGNVAFGYKGRVVVAIFMYLDLYLVAVELLTLGGDSLQYMFPNLNFKIATLSIKGDIGFILLTALAILPTTWLRSFGALAYISASGVLVCLILIWCVLWAGAVDGVGFHEKGQLMNLRGFPAALSIFNFCYSAHAVFPTLSYSMRDKRQFDKVLLYCFVTSTTGYGLMSIIGYLMFGNYSKSQVILNLPMNKINTNIAIYTSLFVPFTKYAIMVTPIAIAIEDKLHSNSKFSSVLIRTMIVVSTTLVAIFVPYFGYVMMLIGALSGVAMAFLLPCLCYLKINVAARKFGLEFMVIVGIILAGSLICVFGSYISISEIVYRWKREKFIN. 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01522 406 PANTHER OS05G0424000 PROTEIN-RELATED 22 381 - -
Seca9g01522 406 Pfam Transmembrane amino acid transporter protein 12 392 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01522 Seca-Chr9 25879275 25883483 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01522 2 396 Amino Acid or Auxin Permease AAAP Family AT3G28960 44.000 1.32e-120 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01522 K15015 - pvy:116132859 487.648