Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g01513 | ATGGCTACTGAGCCTGATGTCTCTGAGATTTCCTCTCTGTTCGAAAGGCTGGTGAGAAACAGAGACATGTCTCTGTTTTTGCCCTTCTTCTTTGGCTTCTCAGACGCTTCTCCTAGGACAGATAGGGAGGAGGACCCAGATCAGGAAACTGAGCGAAATGAAGGTTCTCAGCATCAAAGAATCATCTTGGTGAACCCCTTCACACAGGGCATGGTGGTAATTGATGGGGCTTCAAGCCTTGAGGCTCTGTTCCGCGAGCTTGGGAATACCAAGGGTGGTCGACCACCGGCTTCCAAGGAATCCATTGACGCTATGGCAAGTGTTGAAATTGGAGAAGGTGAAGATGGGGAGTGTGTTGTTTGTCTGGAGGACTTTGAGGTTGGTGGGGTGGTAAAAGAGATGCCTTGTAAGCATAGGTTTCATCAAAATTGCATTGAGAAGTGGTTGGGGATTCATGGGTCTTGCCCTGTTTGCAGGTATGAGATGCCTGTTGATGAGAAAGATGTGGGCAAGAAAAGGGATGAAGAAGGGGGAGAGAGGAGGAGGGGAGGTGGAGAAGTTTGGGTTAGTTTTTCTTTCAATGGAAGTAGGAGAAGCCAGGATCAAAATCAAGCTTCTCCTGCTGATGATTCAAGTGATTCTTCATCAAGTCCTGGCGGTGATGCTGAGGTAGAGAATTGA | 681 | 0.4802 | MATEPDVSEISSLFERLVRNRDMSLFLPFFFGFSDASPRTDREEDPDQETERNEGSQHQRIILVNPFTQGMVVIDGASSLEALFRELGNTKGGRPPASKESIDAMASVEIGEGEDGECVVCLEDFEVGGVVKEMPCKHRFHQNCIEKWLGIHGSCPVCRYEMPVDEKDVGKKRDEEGGERRRGGGEVWVSFSFNGSRRSQDQNQASPADDSSDSSSSPGGDAEVEN. | 227 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g01513 | 226 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 85 | 165 | IPR013083 | - | |
Seca9g01513 | 226 | MobiDBLite | consensus disorder prediction | 37 | 58 | - | - | |
Seca9g01513 | 226 | MobiDBLite | consensus disorder prediction | 167 | 226 | - | - | |
Seca9g01513 | 226 | ProSiteProfiles | Zinc finger RING-type profile. | 118 | 159 | IPR001841 | - | |
Seca9g01513 | 226 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 39 | 163 | - | - | |
Seca9g01513 | 226 | SMART | ring_2 | 118 | 158 | IPR001841 | - | |
Seca9g01513 | 226 | Pfam | Ring finger domain | 117 | 159 | IPR001841 | - | |
Seca9g01513 | 226 | MobiDBLite | consensus disorder prediction | 37 | 56 | - | - | |
Seca9g01513 | 226 | FunFam | E3 ubiquitin-protein ligase RNF181 | 86 | 165 | - | - | |
Seca9g01513 | 226 | MobiDBLite | consensus disorder prediction | 167 | 183 | - | - | |
Seca9g01513 | 226 | MobiDBLite | consensus disorder prediction | 192 | 226 | - | - | |
Seca9g01513 | 226 | SUPERFAMILY | RING/U-box | 101 | 165 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g01513 | Seca-Chr9 | 25801257 | 25801937 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca9g01513 | 1 | 201 | C3H Transcription Factor Family | AT1G26800 | 54.146 | 1.71e-69 | 210 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g01513 | - | - | pcin:129321278 | 273.863 |