Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01511 ATGGCCAGTTTAACACCAAATAGCATGATTGGTAATTTTCTCATTTGGTATAATATTATTGCTCTTTGTGGTGCAGAATACACAGAAACCAAGAGCAGTGATGGTCATTGCAGCAGGGAAATCAGCCTTGGGGCCCAGAATCAAATCAATGAAAACTTGCAGATAGCTCAGGCTCTCCAAATGCAAATGGAAGTGCAGAAGAAACTTTATGAACAAATTGAGGTGCAGAAACATTTGCAGCTTAGAATTGAAGCTCAAGGAAAGTACTTACAATCAGTACTAAAGAAAGCACAGGAAGCACTTGCTGGATACAATTCTTCCCCAGTGGGTATAGAACTCACAAAAGCTGAACTTTCTCAGCTAGTTACCATGATCAACAATGCTTGCCCAGGCTCTCCAATCTCAGAACTGACAGAAACAAAAGGGTGGGGTTTGAACTGTGGGGAGAGGAAAAGAGACAGAGGAACTATGTGTTCACTGGAAAGTTCTTTGACATCTTCTGAAAGCTGTGGAAGAAAGGAAGAGAAACAACCAATGGAAGAAATAGGGGAGTTCAAAAACTCCAATACTATTTCACTTGAATTGCCATTTATGGCTATGCACCCTGAAGATAAAGCATCCAATGGAGATTCAAGTAATGGGAGAAAGAGAAATGTAGCAATGAAATCTGATGATAGCTGTGTTGAGCAACCATCTGGGAAAAGATGTGGGAACAAGTTGAGGAATCCCATGTTGTCAGAAATGCTTGACTTGAACAGCAAATGTCAGAGTGACATGGACTCAACAAGTTCAAAAACATTAGACTTAAATTGCAGTTTAAATTTTTGGGAACCATGA 837 0.4002 MASLTPNSMIGNFLIWYNIIALCGAEYTETKSSDGHCSREISLGAQNQINENLQIAQALQMQMEVQKKLYEQIEVQKHLQLRIEAQGKYLQSVLKKAQEALAGYNSSPVGIELTKAELSQLVTMINNACPGSPISELTETKGWGLNCGERKRDRGTMCSLESSLTSSESCGRKEEKQPMEEIGEFKNSNTISLELPFMAMHPEDKASNGDSSNGRKRNVAMKSDDSCVEQPSGKRCGNKLRNPMLSEMLDLNSKCQSDMDSTSSKTLDLNCSLNFWEP. 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01511 278 MobiDBLite consensus disorder prediction 202 240 - -
Seca9g01511 278 Pfam MYB-CC type transfactor, LHEQLE motif 53 99 IPR025756 -
Seca9g01511 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 42 209 IPR044848 GO:0003700
Seca9g01511 278 Coils Coil 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01511 Seca-Chr9 25790265 25791736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01511 50 236 G2-like Transcription Factor Family AT1G69580 43.915 3.92e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01511 - - gmx:100784670 394.815