Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01506 ATGGCTATAATCGAACTGTGGCCTCAATTCCTCTTCTCTCAATACCCCATCCCAAAACCCTACAAAAACCTTAATATCAATCTCAGAAACAGAGTATCTTGTCAAAACTTGACATCCATCGCCCAATTTTCTCATCAACCAAACACCCTCTCAGACCGTGGCCTCATTTTCCGGGAAAAAGTGCTCTACCTCGAGAAACTGAACGTGAACCCCGAAAAGGTGCTCCGAGAAAACCCTAGCCTCCGAACTTGCCCTCTCGGTACCCTGGAATCGGTGGAGCGATGCCTTTCCTCGATGGGCATCCACCGCAGCGCCATGGGTCGCATCCTCGACATGCTCCCCGAGCTCCTCACGTGCGACCCCCACAGTGACCTCTACCCCCTCCTCGATTTCCTCCTCAACGAGGTTCGAATCCCTTACCCCGACGTTCAAAAATCGATTTTGCGGTGCCCCAGATTGCTGGTTTGTAGCGTTGAGCATCGATTGAGACCCGCTCTGTTGTTTTTGAGGGAATTAGGGTTTGTTGGACCCCACTCCCTCACGTGCCAGACCACGCTGCTTCTGGTGTCCAGCGTGGAGGACACCCTTTTGCCCAAGATTGAGTTTTTGAGAGGTTTGGGATTCACACGCGTGGAGGTTTCCAACATGGTCTTGAGGTCCCCTTCGTTGTTGACTTTGAGTATTGCAAACAATTTGGCGCCGAAGGTGGATTTTTTCTTGAAGGAAATGAAAGGAGACCTTGCGGAGCTCAAGAGGTTCCCTCAGTACTTCTCTTTTAGCTTGGAAGGGAGGATCAAGCCACGCCACGCCATGCTGGTAAAGCACGGCTTGTCCCTTCCTTTACAACAAATGTTGAAGGTTAGTGATGGCGGTTTTGAATCTAGATTGTTTGAAATGCGGTTACGGGCGCTTGAGGGAACACAGCGGTAG 930 0.5086 MAIIELWPQFLFSQYPIPKPYKNLNINLRNRVSCQNLTSIAQFSHQPNTLSDRGLIFREKVLYLEKLNVNPEKVLRENPSLRTCPLGTLESVERCLSSMGIHRSAMGRILDMLPELLTCDPHSDLYPLLDFLLNEVRIPYPDVQKSILRCPRLLVCSVEHRLRPALLFLRELGFVGPHSLTCQTTLLLVSSVEDTLLPKIEFLRGLGFTRVEVSNMVLRSPSLLTLSIANNLAPKVDFFLKEMKGDLAELKRFPQYFSFSLEGRIKPRHAMLVKHGLSLPLQQMLKVSDGGFESRLFEMRLRALEGTQR. 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01506 309 Gene3D Transcription termination factor 3, mitochondrial 88 305 IPR038538 -
Seca9g01506 309 PANTHER CGI-12 PROTEIN-RELATED 70 298 IPR003690 GO:0003690|GO:0006355
Seca9g01506 309 SMART mt_12 247 278 IPR003690 GO:0003690|GO:0006355
Seca9g01506 309 SMART mt_12 214 246 IPR003690 GO:0003690|GO:0006355
Seca9g01506 309 SMART mt_12 178 209 IPR003690 GO:0003690|GO:0006355
Seca9g01506 309 SMART mt_12 107 139 IPR003690 GO:0003690|GO:0006355
Seca9g01506 309 SMART mt_12 72 102 IPR003690 GO:0003690|GO:0006355
Seca9g01506 309 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Seca9g01506 309 Pfam mTERF 142 293 IPR003690 GO:0003690|GO:0006355
Seca9g01506 309 Pfam mTERF 72 174 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01506 Seca-Chr9 25693646 25694575 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Seca9g01506 mTERF 2.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01506 K15032 - csin:114282080 380.948