Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g01506 | ATGGCTATAATCGAACTGTGGCCTCAATTCCTCTTCTCTCAATACCCCATCCCAAAACCCTACAAAAACCTTAATATCAATCTCAGAAACAGAGTATCTTGTCAAAACTTGACATCCATCGCCCAATTTTCTCATCAACCAAACACCCTCTCAGACCGTGGCCTCATTTTCCGGGAAAAAGTGCTCTACCTCGAGAAACTGAACGTGAACCCCGAAAAGGTGCTCCGAGAAAACCCTAGCCTCCGAACTTGCCCTCTCGGTACCCTGGAATCGGTGGAGCGATGCCTTTCCTCGATGGGCATCCACCGCAGCGCCATGGGTCGCATCCTCGACATGCTCCCCGAGCTCCTCACGTGCGACCCCCACAGTGACCTCTACCCCCTCCTCGATTTCCTCCTCAACGAGGTTCGAATCCCTTACCCCGACGTTCAAAAATCGATTTTGCGGTGCCCCAGATTGCTGGTTTGTAGCGTTGAGCATCGATTGAGACCCGCTCTGTTGTTTTTGAGGGAATTAGGGTTTGTTGGACCCCACTCCCTCACGTGCCAGACCACGCTGCTTCTGGTGTCCAGCGTGGAGGACACCCTTTTGCCCAAGATTGAGTTTTTGAGAGGTTTGGGATTCACACGCGTGGAGGTTTCCAACATGGTCTTGAGGTCCCCTTCGTTGTTGACTTTGAGTATTGCAAACAATTTGGCGCCGAAGGTGGATTTTTTCTTGAAGGAAATGAAAGGAGACCTTGCGGAGCTCAAGAGGTTCCCTCAGTACTTCTCTTTTAGCTTGGAAGGGAGGATCAAGCCACGCCACGCCATGCTGGTAAAGCACGGCTTGTCCCTTCCTTTACAACAAATGTTGAAGGTTAGTGATGGCGGTTTTGAATCTAGATTGTTTGAAATGCGGTTACGGGCGCTTGAGGGAACACAGCGGTAG | 930 | 0.5086 | MAIIELWPQFLFSQYPIPKPYKNLNINLRNRVSCQNLTSIAQFSHQPNTLSDRGLIFREKVLYLEKLNVNPEKVLRENPSLRTCPLGTLESVERCLSSMGIHRSAMGRILDMLPELLTCDPHSDLYPLLDFLLNEVRIPYPDVQKSILRCPRLLVCSVEHRLRPALLFLRELGFVGPHSLTCQTTLLLVSSVEDTLLPKIEFLRGLGFTRVEVSNMVLRSPSLLTLSIANNLAPKVDFFLKEMKGDLAELKRFPQYFSFSLEGRIKPRHAMLVKHGLSLPLQQMLKVSDGGFESRLFEMRLRALEGTQR. | 310 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g01506 | 309 | Gene3D | Transcription termination factor 3, mitochondrial | 88 | 305 | IPR038538 | - | |
Seca9g01506 | 309 | PANTHER | CGI-12 PROTEIN-RELATED | 70 | 298 | IPR003690 | GO:0003690|GO:0006355 | |
Seca9g01506 | 309 | SMART | mt_12 | 247 | 278 | IPR003690 | GO:0003690|GO:0006355 | |
Seca9g01506 | 309 | SMART | mt_12 | 214 | 246 | IPR003690 | GO:0003690|GO:0006355 | |
Seca9g01506 | 309 | SMART | mt_12 | 178 | 209 | IPR003690 | GO:0003690|GO:0006355 | |
Seca9g01506 | 309 | SMART | mt_12 | 107 | 139 | IPR003690 | GO:0003690|GO:0006355 | |
Seca9g01506 | 309 | SMART | mt_12 | 72 | 102 | IPR003690 | GO:0003690|GO:0006355 | |
Seca9g01506 | 309 | SMART | mt_12 | 144 | 175 | IPR003690 | GO:0003690|GO:0006355 | |
Seca9g01506 | 309 | Pfam | mTERF | 142 | 293 | IPR003690 | GO:0003690|GO:0006355 | |
Seca9g01506 | 309 | Pfam | mTERF | 72 | 174 | IPR003690 | GO:0003690|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g01506 | Seca-Chr9 | 25693646 | 25694575 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | mTERF | Seca9g01506 | mTERF | 2.3e-31 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g01506 | K15032 | - | csin:114282080 | 380.948 |