Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01429 ATGTCCGCTGAAAAAGAGAGAGAGACCCAGGTTTACTTGGCCAAGCTTGCTGAACAGGCCGAGAGATATGAAGAAATGGTTGAATGTATGAAGAAAGTGGCAAAACTTGATCTTGATCTAACTGTGGAAGAGAGGAACTTGCTCTCAGTGGGATATAAAAATGTCATTGGTGCACGGAGGGCCTCTTGGCGTATTATGTCCTCAATTGAGCAGAAGGAAGAGTCTAAGGGAAATGAACACAATGTTAAACTGATCAAGAGTTACTGCCAGAAGGTTGAGGAGGAACTCTCCAAAATATGTGGTGACATTCTGACAATTATAGACCAGCATCTGATTCCTTCTTCCACCTCAGCAGAAGCTAATGTTTTCTACTATAAGATGAAAGGTGATTATTTCCGGTATCTTGCTGAGTTCAAGACGGACCAAGAAAGGAAAGAGGCCGCTGAGCAGTCACTGAAAGGATATGAAGCTGCTTCAGCCACTGCAAACACAGATCTTCCATCAACACATCCAATCCGCCTTGGACTTGCACTCAACTTCTCTGTTTTTTATTATGAGATAATGAACTCTCCTGAAAGGGCCTGCCATTTGGCTAAACAAGCATTTGATGAGGCAATTGCAGAGTTGGACACGTTGAGTGAGGAATCATATAAGGACAGCACTTTAATCATGCAATTGTTGAGAGACAACCTTACACTCTGGACCTCCGATTTGCCAGAGGATGGAGGTGAGGAGAACACGAAAGCTGAAGAATCCAAACCTGCTGAGCCCGAGAATTTGATAATCTTCTATTTTGCAGCATTGACAAGGTTCCTTTGGATCTCTGGCCCTGATTCAGTAGTCAAATATCTAAGGTACTCTGCAAAGAGGGCATTTTTCAGCTTTTCTTGCAATGGATTTGGACCGGACAATGTGGACTGTGGCCACTTCATAATTCTTTAG 942 0.4321 MSAEKERETQVYLAKLAEQAERYEEMVECMKKVAKLDLDLTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKSYCQKVEEELSKICGDILTIIDQHLIPSSTSAEANVFYYKMKGDYFRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEENTKAEESKPAEPENLIIFYFAALTRFLWISGPDSVVKYLRYSAKRAFFSFSCNGFGPDNVDCGHFIIL. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01429 313 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Seca9g01429 313 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Seca9g01429 313 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Seca9g01429 313 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Seca9g01429 313 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Seca9g01429 313 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Seca9g01429 313 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Seca9g01429 313 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Seca9g01429 313 Coils Coil 13 33 - -
Seca9g01429 313 Gene3D - 1 249 IPR036815 -
Seca9g01429 313 SMART 1433_4 7 248 IPR023410 -
Seca9g01429 313 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Seca9g01429 313 Pfam 14-3-3 protein 13 235 IPR023410 -
Seca9g01429 313 Coils Coil 195 215 - -
Seca9g01429 313 PANTHER 14-3-3 PROTEIN 7 237 IPR000308 -
Seca9g01429 313 FunFam 14-3-3 protein epsilon 1 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01429 Seca-Chr9 24799521 24802221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01429 3 253 14-3-3 family AT1G26480 86.454 1.48e-161 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01429 - K06630 gmx:100529130 498.819