Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01409 ATGGATGTTGTTTCGAAGGGTAATAATGTAGGAGATGCGGAAAATATATCCGTGCAAGCTTTGGATGACATGTCTAATTATGGGGATAATGATGAAGCAAATTATGAGAATGAAAGTGACGAAAGTGAATCCGGAGAAGAATATTCAAGCACAGATGAAGACGAAGCAAGTGCAAGGAATGGTGATGATGGTATGGCTATTGATGGCATACATGACTTTCCCAATGTTAATTGGAAAAGTCTTAGCTTGGAGGAGTTTATGAAATATCATTTTGTGGATCGTGAGGTTGCTTTTACGTTCTATAATTGGTTTGCAAGAAGGAGGGGGTTTTCTGCGCGAAAGTGCAACGTTGGAAAGACAAAGAATGAAGTAGTTGTGCGACAAACTTTTGTTTGCTCTAGAAATGGAACTAATAAGGGCAAGAAGGAAGGTTATAAAAGGGAACCTAAACGAATTGTAAGATGCGAATGTAAAGCCCGTTGCAGGGTTCGTCGCAATGCATAA 504 0.3948 MDVVSKGNNVGDAENISVQALDDMSNYGDNDEANYENESDESESGEEYSSTDEDEASARNGDDGMAIDGIHDFPNVNWKSLSLEEFMKYHFVDREVAFTFYNWFARRRGFSARKCNVGKTKNEVVVRQTFVCSRNGTNKGKKEGYKREPKRIVRCECKARCRVRRNA. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01409 167 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 165 - -
Seca9g01409 167 MobiDBLite consensus disorder prediction 33 51 - -
Seca9g01409 167 MobiDBLite consensus disorder prediction 1 66 - -
Seca9g01409 167 MobiDBLite consensus disorder prediction 10 24 - -
Seca9g01409 167 Pfam FAR1 DNA-binding domain 99 166 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01409 Seca-Chr9 24608322 24609907 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g01409 FAR1 2.9e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01409 - K17604 mtr:112417123 102.064