Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g01409 | ATGGATGTTGTTTCGAAGGGTAATAATGTAGGAGATGCGGAAAATATATCCGTGCAAGCTTTGGATGACATGTCTAATTATGGGGATAATGATGAAGCAAATTATGAGAATGAAAGTGACGAAAGTGAATCCGGAGAAGAATATTCAAGCACAGATGAAGACGAAGCAAGTGCAAGGAATGGTGATGATGGTATGGCTATTGATGGCATACATGACTTTCCCAATGTTAATTGGAAAAGTCTTAGCTTGGAGGAGTTTATGAAATATCATTTTGTGGATCGTGAGGTTGCTTTTACGTTCTATAATTGGTTTGCAAGAAGGAGGGGGTTTTCTGCGCGAAAGTGCAACGTTGGAAAGACAAAGAATGAAGTAGTTGTGCGACAAACTTTTGTTTGCTCTAGAAATGGAACTAATAAGGGCAAGAAGGAAGGTTATAAAAGGGAACCTAAACGAATTGTAAGATGCGAATGTAAAGCCCGTTGCAGGGTTCGTCGCAATGCATAA | 504 | 0.3948 | MDVVSKGNNVGDAENISVQALDDMSNYGDNDEANYENESDESESGEEYSSTDEDEASARNGDDGMAIDGIHDFPNVNWKSLSLEEFMKYHFVDREVAFTFYNWFARRRGFSARKCNVGKTKNEVVVRQTFVCSRNGTNKGKKEGYKREPKRIVRCECKARCRVRRNA. | 168 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g01409 | 167 | PANTHER | FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED | 5 | 165 | - | - | |
Seca9g01409 | 167 | MobiDBLite | consensus disorder prediction | 33 | 51 | - | - | |
Seca9g01409 | 167 | MobiDBLite | consensus disorder prediction | 1 | 66 | - | - | |
Seca9g01409 | 167 | MobiDBLite | consensus disorder prediction | 10 | 24 | - | - | |
Seca9g01409 | 167 | Pfam | FAR1 DNA-binding domain | 99 | 166 | IPR004330 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g01409 | Seca-Chr9 | 24608322 | 24609907 | Dispersed/Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | FAR1 | Seca9g01409 | FAR1 | 2.9e-10 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g01409 | - | K17604 | mtr:112417123 | 102.064 |