Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01387 ATGGATGAAACACAAGGCCAGCACTATTCTTCCAGCCTACCTGAGCCTGCCTTATCTCATGACAGTAGTGAGAGGTCTTATTTCAATGGGCAGCAAATGAATCGTGGGACTGGTATATCAGGCCTGAAGAAGAGAGGTCATGGAAGTCGCTCTTGGATAAAAATTGGTCAGGATGGAGAATCTAAGACTGTGATGCTTGACAAGGCTACTATTATGAGACATTGTTCTTTGCCTTCTAGAGATCTCCGACTATTGGATCCGATGTTCATTTATCCTTCTACAATATTAGGACGGGAGAAGGCTATTGTAGTCAACCTTGAGCAAATCCGATGTATAATCACTGCTGAGGAGGTCATCCTGATGAATTCATTGGATGGTAGTGTTGGTCAGTACAGGTCAGAATTATGCAACCGGCTTCAGAAAGAAAAAGCTGATTTTTGGACAGATGATCTACCTTTTGAATTTAGGGCACTGGAGTTGGCTCTGGAATTGACATGCACATCTTTGGATGCTCAGGTAAAAGAACTGGAAATGGAAATATATCCCGTGCTAGATGAACTAGCCTCATCTATCAGTACACTCAATCTGGAACGTGTTCGAAGATTTAAAGGTCACCTCCTCGCCATGACTCAGCGAGTTCAGAAGGTCCGTGATGAAATAGAACATCTCATGGATGATGATGGTGACATGGCTGAGATGTGCCTGACTGAGAAAAGGAGAAGATCAGACGCTTACCCTTCAAATGATTATTTTCAAACTCGTCCATTTGGTGGAGTGATTTCAAAATCAGCTCCTGCTTCACCAGAGCGATCAATTAGTGGGGTCCAGATGTTGCAGAGGGCTTTCAGCAGCATTGCAAATTCTAGTAAACATGGTAGTTCGATGGGATCGTCTGATATTGGGGAAAGGATTGAACCACTGGAAATGTTGCTGGAAGCATACTTTATCGTCATTGATAATACTCTTAACACGTTATTATCGCTCAAAGAATACATTGATGACACAGAAGATTTTATCAACATAAAATTGGGAAATATTCAAAACCGCCTAATACAGTTTGAGTTGCTTCTTACAGCAGCTATGTTGGTAGCTGCAGTATTTGCTGCTGTGACAGGAGTATTTGGAATGAACTTTGAAACAACAGTTTTTGACTATCCATCTGGATTCAATTGGGTTTTGGTAATTACTGGAATTACTTGTGCATCATTGTATTTCTCCTTCCTATTCTATTTTAGGCACAAGAAAGTGCTTGCAGCATAA 1260 0.4127 MDETQGQHYSSSLPEPALSHDSSERSYFNGQQMNRGTGISGLKKRGHGSRSWIKIGQDGESKTVMLDKATIMRHCSLPSRDLRLLDPMFIYPSTILGREKAIVVNLEQIRCIITAEEVILMNSLDGSVGQYRSELCNRLQKEKADFWTDDLPFEFRALELALELTCTSLDAQVKELEMEIYPVLDELASSISTLNLERVRRFKGHLLAMTQRVQKVRDEIEHLMDDDGDMAEMCLTEKRRRSDAYPSNDYFQTRPFGGVISKSAPASPERSISGVQMLQRAFSSIANSSKHGSSMGSSDIGERIEPLEMLLEAYFIVIDNTLNTLLSLKEYIDDTEDFINIKLGNIQNRLIQFELLLTAAMLVAAVFAAVTGVFGMNFETTVFDYPSGFNWVLVITGITCASLYFSFLFYFRHKKVLAA. 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01387 419 Gene3D Magnesium transport protein CorA, transmembrane region 357 417 - -
Seca9g01387 419 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 356 408 IPR045863 -
Seca9g01387 419 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 20 417 IPR039204 -
Seca9g01387 419 Gene3D - 40 123 - -
Seca9g01387 419 MobiDBLite consensus disorder prediction 1 38 - -
Seca9g01387 419 Coils Coil 206 226 - -
Seca9g01387 419 FunFam Magnesium transporter MRS2-1 40 123 - -
Seca9g01387 419 Gene3D Magnesium transport protein CorA, transmembrane region 126 350 - -
Seca9g01387 419 MobiDBLite consensus disorder prediction 1 50 - -
Seca9g01387 419 CDD Mrs2_Mfm1p-like 52 416 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01387 Seca-Chr9 24468852 24478490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01387 1 417 MRS2 Gene Family AT2G03620 64.706 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01387 K16075 - gmx:100803935 688.723