Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01379 ATGGATTTAAATAGTGATGATTCGGCTGTTAATTTGGATGATGATAGAGACCTTAGTTTTAGTGATTCTTCTAGCTCTAGCGATGTTAATGAAGAAGAGGGAGACAGTGATCACGGAAATGATATTTTGGATGCAGAAGTTGGAGGGGGTGTGTCAAGGAGGATAATTGATTTGACAATTGATGATATATGTGCATTGGAATTCTGTAGTGAAAATGATGCTTTCAATTTTTACTTTTCTTATGCAAGATGTCATGGTTTTGCTGTGAGGAGGGATGATGTAATTAAAGACAGTAAAGGTATGCTCATAATGCGACAGTTCTTATGTAGTAGGGCTGGTTTGAGGGACAAAAAGCATTTGATTAGGTTAGATCAGAAAAAGGAACATAGGCCTCTAACTCGAACAAATTGTCAAGCTAAGTTGAGGGTTCGGTTTGATTATAAGACCGGGAAATATAAGGTTGTTTCCTTTTTAGACTCCCATAACCATGAATTGACCCCTGCTAAATTTGTACCTTTAATTCCTGCATATCGTGGTTTGAGTGATGGGGACAAAGCCCAAGTTGATGCATTGCATTCTCATGGTGTTAGACCATGTCAGATAATGGGTTTTCTTGTTGATCAAAAAGGAGGTTATAGAAACGTTGGTTTTCAAAGAAAGATTTATACAACTACATAG 678 0.3717 MDLNSDDSAVNLDDDRDLSFSDSSSSSDVNEEEGDSDHGNDILDAEVGGGVSRRIIDLTIDDICALEFCSENDAFNFYFSYARCHGFAVRRDDVIKDSKGMLIMRQFLCSRAGLRDKKHLIRLDQKKEHRPLTRTNCQAKLRVRFDYKTGKYKVVSFLDSHNHELTPAKFVPLIPAYRGLSDGDKAQVDALHSHGVRPCQIMGFLVDQKGGYRNVGFQRKIYTTT. 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01379 225 Pfam FAR1 DNA-binding domain 76 166 IPR004330 -
Seca9g01379 225 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 20 214 - -
Seca9g01379 225 MobiDBLite consensus disorder prediction 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01379 Seca-Chr9 24362688 24363408 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g01379 FAR1 1.1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01379 - - ccaj:109794460 227.254