Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01375 ATGGATCGGAACTCTTTCTCTCCCCGAACCCGGAAAACCCGACCCAAATCTGATATATACTCCACCTTCGTGGTCCATGACGACGATGACGACGACGGTGACGGCGAAACCAATCGGCGGCGGAAAGCCGGAAGCGCAGAAACACAGGACGATCCATATGCGACAATGGTATACAAAGGCAACGGCCTCGACGACGATGAAGACTCCTCTCTCCCTCCTCTCCTCAAGCGCCTCCCCAAGGATTTCGGCGGCGGAGCGCCACTGGACTACGACGACGATGAAGACAATGATGCCGGCGATTTCGGTACCGTGATTGTGAAGACCGATCGGAGCCGGCAGCGCGATCGGTCTTCTTCTTCGGGCTTTGCTTCACCGGCGGGCTCGACCTGGAAGTCTCGGAGTTCTTCTCAGGCGAGTCCTTTGGACAGGTTCGGTAGCGGCGATGATGAGCATGATGGCGATGACGATGATGGCGGGTTTTCAACCTTCGTCGTGCGTTCGACGGCGAGGTCCGGCGAGAGGGAGTCGGTAAGTGGAACCGTGGTGCGGCGGACAGGCGGCAGCGGCAGTTCGACGATGGAGAGGGCGGTGGCGAGTATGCAGGCGGTGGGGGAGTTTGGACTCGGGAAGCATAGAAAGGGAAGTGGATCCTCGCAGAACGAGGAGGGGAAGCAACAATCGATAACGACCAAGGTTTCGTCGAGTTCGATCCCTGAGAGTGTTACCAGAGAGGACCCTACCACCAAGTACGAATTGCTCAATGAACTTGGGAAGGGGTCCTATGGAGCTGTTTACAAAGCAAGGGATTTAAGAACCTCGGAGATGGTTGCTATCAAAGTCATATCATTATCTGAAGGGGAGGAGGGGTATGAGGAAATCCGTGGTGAGATTGAGATGTTACAACAATGTAATCATCCAAATGTCGTCCGTTATCTTGGAAGTTATCAAGGAGAGGAGTATCTTTGGATAGTGATGGAATACTGCGGTGGTGGTAGTGTTGCTGATCTGATGAACGTGACTGATGAACCACTGGATGAAGGTCAAATAGCATATATCTGTAGAGAAGCACTGAAGGGACTTGAATATTTGCACTCAATTTTTAAAGTCCATAGAGACATTAAAGGTGGGAATATCTTATTAACTGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCGCAGCTTACAAGGACTATGTCAAAGCGCAATACGTTCATTGGAACCCCTCATTGGATGGCTCCGGAAGTCATTCAGGAAAGTCGCTATGATGGGAAGGTAGATGTTTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCCGAGGGTGTTCCTCCAAGATCGTCAGTGCATCCTATGAGGGTTTTATTCATGATATCCATTGAACCAGCTCCAATGCTTGAGGATAAAGAAAAATGGTCTCTATATTTCCATGATTTTGTTGCAAAGTGCCTGACCAAAGAACCTCGTCTCCGCCCTCCTGCAGCTGAGATGTTGAAGCACAAATTCTTTGAAAAATGGAAAACCGGATCTGCTGCAATGTTGCCAAAACTAGAAAAGGCAAGGCAAATCAGGGCTTCAATGGCTTTGCAGGCACAAACTCTTCCTCCAGGTGCATCAGAAGACCGGCAGCCCATGTTAGATTCAAAGCTAAATGATGAATATGGAGATACTGTTCCATCCAGACCTAATAACATAGGCCTTGAGGGCGCTACTGATCTCTCATCACATGGCACTATGAGGAAGCTGCATAAGGTGGAAGATGTGGACACAAGTGAAGGCAACTTTGGCACTGTAATAGTCCATGGAGATGAATTACATAAGACCACACAGGATGCAGATTCTGCAGTTTCCTTGTCTACGCCCCCCAGTGGCACAGGAGTCAGATTATCTGACCCTAGGGTTGACAGTCTAAAAGTTGGTGATGTGAACAATGCCTCTTTTAGAGGATCTAGTCCTACTACAGATACCATACAATCGTCTTTACCTTATGTTAGTAATTCCACTGAGCTGAACCTCAGAAGAGAAGGTAGCCATCGAACACACACTGGAATTGGTAGTGATATAAGCAATAGCACATTGAAGAGTGAAACAGTCAGCCGCAAAGCATTTGCTTTACAAGATAAGCTATGGTCCATTTATGCTGCTGGTAATACAGTGCCCATACCATTCTTAAGGGCGACAGATATATCACCTATTGCTCTCCTTTCAGACAATGTGCTTGGTGGCATACAACAGGATACCAGTGGAACTGGAACACTAGAAGCATTGCAAGAGCTTTTTAGTGGTGATGGACAGTCCAAAAAGGGTCGGAGAGGACTAAATGAGCAGATGCCGCTTCCTCCAAGCATTTACCAAAGATTGACATCAAGTTCTACTCTAATGAATTTGGCACAGGCTTTAGCTTACCATAAGATGTGTTACGAAGATATGCCACTGCAGGAACTACAAGCAACCCAGGAGCAGCGGACTATTCAAAATCTCTCTGATACACTTCGTACAATTCTTCGGTTGTAG 2517 0.4803 MDRNSFSPRTRKTRPKSDIYSTFVVHDDDDDDGDGETNRRRKAGSAETQDDPYATMVYKGNGLDDDEDSSLPPLLKRLPKDFGGGAPLDYDDDEDNDAGDFGTVIVKTDRSRQRDRSSSSGFASPAGSTWKSRSSSQASPLDRFGSGDDEHDGDDDDGGFSTFVVRSTARSGERESVSGTVVRRTGGSGSSTMERAVASMQAVGEFGLGKHRKGSGSSQNEEGKQQSITTKVSSSSIPESVTREDPTTKYELLNELGKGSYGAVYKARDLRTSEMVAIKVISLSEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTDEPLDEGQIAYICREALKGLEYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGVPPRSSVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPPAAEMLKHKFFEKWKTGSAAMLPKLEKARQIRASMALQAQTLPPGASEDRQPMLDSKLNDEYGDTVPSRPNNIGLEGATDLSSHGTMRKLHKVEDVDTSEGNFGTVIVHGDELHKTTQDADSAVSLSTPPSGTGVRLSDPRVDSLKVGDVNNASFRGSSPTTDTIQSSLPYVSNSTELNLRREGSHRTHTGIGSDISNSTLKSETVSRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGIQQDTSGTGTLEALQELFSGDGQSKKGRRGLNEQMPLPPSIYQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTILRL. 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01375 838 FunFam serine/threonine-protein kinase dst1 isoform X1 247 537 - -
Seca9g01375 838 MobiDBLite consensus disorder prediction 219 243 - -
Seca9g01375 838 MobiDBLite consensus disorder prediction 33 47 - -
Seca9g01375 838 ProSiteProfiles Protein kinase domain profile. 250 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01375 838 Gene3D Transferase(Phosphotransferase) domain 1 246 535 - -
Seca9g01375 838 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 232 544 - -
Seca9g01375 838 MobiDBLite consensus disorder prediction 1 194 - -
Seca9g01375 838 MobiDBLite consensus disorder prediction 208 246 - -
Seca9g01375 838 MobiDBLite consensus disorder prediction 1 26 - -
Seca9g01375 838 SMART serkin_6 250 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01375 838 SUPERFAMILY Protein kinase-like (PK-like) 247 505 IPR011009 -
Seca9g01375 838 CDD STKc_MAP4K3_like 249 504 - -
Seca9g01375 838 MobiDBLite consensus disorder prediction 117 142 - -
Seca9g01375 838 FunFam Aurora kinase A 242 331 - -
Seca9g01375 838 Pfam Protein kinase domain 250 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01375 838 ProSitePatterns Protein kinases ATP-binding region signature. 256 279 IPR017441 GO:0005524
Seca9g01375 838 MobiDBLite consensus disorder prediction 534 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01375 Seca-Chr9 24274401 24287933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01375 1 838 MAP Kinase Kinase Kinase Kinase AT1G69220 60.930 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Seca9g01375 Pkinase 5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01375 - - gmx:100804995 1349.73