Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01353 ATGGGAGAAGATTTGTCTTCAATGAGCCTCAAAGAACTTCAGTGTCTGGAGCAGCAGTTAGATACTTCTCTCAAGAACATCCGTACTCGCAGAAACCAAGTGATGTACGAGTCTATTTCTGAGCTTCAGAAAAAGGAGAAAGAGACACAAGAGCAGAATAACATGCTCGCAAAGAAGATAAAGGAGAAAGAGAAGGCAATGGCACAGCATGCTGCTCAATGGGATCAGGAACCAAACTACAGGGTTGATACATCTTTCTTACTACACGACCCCCTTCCCACTTTGAACATTGGTGGCAATTATCGTCAGGAAGCACCAGAACTGGGGAGGAATGAACTTGACCTGACCCTGGAACCACTCTATTCATGCCAACTTGGGTGCTTTTGA 387 0.4496 MGEDLSSMSLKELQCLEQQLDTSLKNIRTRRNQVMYESISELQKKEKETQEQNNMLAKKIKEKEKAMAQHAAQWDQEPNYRVDTSFLLHDPLPTLNIGGNYRQEAPELGRNELDLTLEPLYSCQLGCF. 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01353 128 Coils Coil 39 73 - -
Seca9g01353 128 ProSiteProfiles K-box domain profile. 1 66 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca9g01353 128 Pfam K-box region 1 60 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01353 Seca-Chr9 23847958 23859932 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01353 1 128 MADS-box Gene Family AT1G69120 53.521 1.40e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01353 K09264 - gmx:100819745 171.014