Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01348 ATGCTTTACCGGGTTGGTATAGGTAATGATGCGCAGAGTGTTGAGGTCGAAAATGCCTTTGGGTCATGGTTGGATGATAAGAGCTACATATCTGGTTCACAATATGGAAGTGTCCTTAATATAAAGGGCCGTCCAGTTTCCATAAATCACACCACTTTCACATCAGATGATTATAATTATTCAGCACCAGAACAACTATATTGGACTGCCAGGACAATGGGTAGCAATGAAGATGCCAACACAAGATACAATTTAACATGGTCATTCCCTGTTGACTCTGGATTCAAATACCTTGTTAGGCTTCATTTCTGTGAGATCTCCTTAGAGGTAACACAGGTCAATCAGAGGGTGTTCAAGGTGTACATAAACAATCAAACAGCAGAGGAGAGTATGGACATTGTTGCTTTGGCTGGTGCTCCATATACTCCTTTATATAGAGACTATGTTGTTATGGTTCCTATGGAAAGTGAGAGAAGGCAAGATATGTGGATAGCACTTCACCCCAACTTGGAGTCAAAACCAAAATATGCTGATGCCATATTGAATGGCGTTGAGATCATCAAGTTAAGTGATAGCAGTTATAATCTTGCAGCAAGTTTCCAACTTGAAAAGGAACAAAAGGAGAAGAAAGTTCCACGAGTCATTGTTGTGGCTGCTACTTTAGGTGCCATTTTGGGGATGTTCATTACAATTTTCATTCTTATCCGCAGAGCATGGAAAAAAACAAAGAGGGAAACTTCTCAGGTACTCCAATTTAATTCTACTTCAACAAGTCACAAAAAAGTTCAAGTAACAGTGGACTCAGGTCAATGCTATCAATTCACATTAGCAGAGATCAGCATTGCTACTAGCAACTTCAGTGAAGCTCTTGTCATTGGGGAGGGAGGCTTTGGAAAGGTGTACAAAGGCATCTTGGCTGATGCTGATGAAGCTACTCATGTGGCAATAAAACGCTCTAAGCCTAGTTCTCGCCAAGGATTTAAGGAGTTTCAAAATGAGATCAATTTTTTCTCATTTAGTCACATGAATCTAGTGTCATTGCTGGGCTACTGCCAGGAGGGCAATGAACTGATACTTGTCTATGAATACATGGCTCAGGGCCCTCTTTGTGATCATTTATACAAGAAACAAAAACAGCCACTGCCATGGAATCTAAGACTAAAGATTTGTGTTGGTGCAGCTCGAGGACTCCATTACCTCCATACAGGCACAAGGCATCCAATGATTCACCGTGATATCAAGTCAGCCAACATATTATTGGATCAGAATTGGGTACCCAAGATTGCAGATTTTGGGTTATCTAAAATAGTTCCTTCAATTTACCACACCCATGTTAGCACTGAGGTTAAGGGTACTTTTGGATATCTAGACCCTGAGTACTATAAGCGAAGAAAACTGACTGAAAAATCTGATGTGTATTCATTTGGAGTAGTTTTGTTTGAAGTGTTATGTGGGAGACCAGCTGTGAATCATGTGGCAGTGGAAGAGGAAAATGAGAAAGTTGGCTTGGTCGATTGGGCCATGCATTGTCACCAATCAGGAAGTGTTGACAGATTAATTGACCCACATTTAGAAGGACAGATAAGGTCAGAATGCCTAATGGCGTTTGTGGACATTGGCATTCAGTGCTTGACTAACAAGAGTGCAGAAAGGCCAACCATGGGAGAGGTGTTAAGTAATTTGGAGAAGATCCTTTCCTGGCAGGAGAGTTTAGAGGAACAAGACATCAATACAACCAATTATGTTCCCTCAGAGAACATAGTTCTCAACTGTGGCTCTAACACAACTGAGCTTGTACAATATGATGGTAGGAACTGGACTGGTGACATTGCTTCACACATCAACTCCCTAATAGCCACAGCCCCTCCAACACTTCAATCCATTCCTCAAGTTCCCTATATGACTGCTCGCATCTTTCACTCTCAATTCACCTACAGATTCAATGTAACCCCAGGTCCTAAATTCATACGCCTTCACTTCTACCCAGCTTCCTACTTGGATCTCAATATCTCCAAAGCTTTCTTATCAGTCACTGCTGGTAACATCACTCTTCTCCATAACTTCAGTGTTTCCCTCAACGCTGATTACTTCAACTCAGCATATTTCATGAAGGAATTCATTGTCCATGTAAGTGGGAGCACCTTAGAACTCACTTTCACCCCATCATCCAATGCTTCTGATGCTTATGCATTTGTGAATGGGATTGAAGTTATTTCAATGCCCCTTGGTTTATACATTCGCGGTGATGATGCCCCTCTTCCTTTAGTTGGCCACTATCCCACATTGGTGTACATTTATAATGATTCCGCCATGGAAAACTTATACAGATTGAATGTAGGAGGTGAGCAAATTCAACCCAAATATGATAAGGCCATGTTTCGCACTTGGGACACTGATGATCGTTACTTATTAGGGGCTAATCTAGATTTTCAACCGTTTAATATGAGCATGCAAGTTGTGTATAAAGGTAATGTTCCAGCGAATTCTGCACCTGAAGACGTCTACCGCACATCCCGTTCAATGGTTAGCTTTGAAAAGGGCCTTGTCAATTTAAATTACAACCTAACGTGGTTTTTTCCTGTTGATTCTGGCTTCAATTATCTAGTTAGGCTTCACATCTGTGAAATTGATTATGATATAACAAAGGTCAATGAGGTAGTTTTTTCTGTATTTTTAAATAATCAAACAGCTGAAGAGCAGTTTGATCCAATTGCCGCAAGTGGGGGGTCTGGAGTCGCTGTATACCGAGACTATGTCGTGATGGCTCCAGAGGATAATGAGGGAAAGCAAGATCTGTGGCTAGAACTGCACCCAAACAAAAAAACTAAACCTAAGTACTACAATGCTTTCTTGAATGGTTTAGAGATTTTTAAACTGAGTTCTGTTGATAAGAATCTTGCAGGGCTTAACCCAGCCAAAAGGAAGCTGGAATCTTATGTAAAGCCTCCCTCTGCACAGATTAAAAATTCAAAGAAACTCACATTCATCCTCATTGGATGTGGACTTGGTGCAGTGGTGGCACTACCAATTCTCCTGTGCTTAGTTCTATACAGGTTGAAGGTGATTAGGCCTGCAAGGATCATGTCATGCTGCGGTCTCATTGTCCTTCCACCCAATCAGGCAAACAAGTCATCATTTGGCAGTCATTTTTCATTGAGAAAGATAAAAGTGGCAACAAATGACTTTGATGAGACTCTAATCATAGGCACAGGAGGATTTGGAAGTGTTTACAAGGGTAGCTTTGATGGTGGGGAAACTTTTATAGCCATAAAACGTGCCAATCCAATGTCAGAACAAGGTGTTATAGAATTTGAGACAGAGGTCCATCTGCTCTCACAGCTCCGGCACAACAACCTAGTCTCACTTTTAGGTTCTTGCAATGAAGATGGGGAGATGATACTGGTCTATGACTTCATGGCCAATGGAACTCTGTATGACCATCTTCATGTGAGGCAGAGAGATCAACCTCCTTTGTCATGGACTCAACGTCTAGAGATATGCATTGGAGTTGCAAGAGGTTTGCATTACCTACACACTGGCACACAACACAGGATCATTCACCGTGACATCAAGACAACCAACATACTCTTAGACCATAATTGGGTGGCCAAAATTTCAGATTTTGGGTTGTCAAAGGCAAGCTACCCTTCCTTAAGCACCACCAACGTCAAGGGCAGCATTGGTTACCTAGATCCAGAGTACTATCAATGCCACAAGTTGACTGAGAAATCTGATATATACTCATTTGGGGTGGTGTTATTGGAGGTGCTGAGTGCAAGGCCTGCTGTACTTCCAGATGAAGATGATGAGCATGTAAACTTGGCTGAATGGGCTGTGTTTTGCTTTGAGAATGACAATGTAGAGCAAATGGTGGACCCCAACTTAGAAGGAAACATAGTTAAGGAGTGCTTTGAGTTATATTTAAAAGTTGCAATGAAATGTTTGGCAGAAAAAGGGGTGGAGAGGCCATCCATTGGTGATGTGCTCCAGAACCTTGTTCTGGCATTGCAACTTCAGAAAAATCCTGGTACTTCCCGAGATGGAAATGTACATAGGAATGATAACACTGGTTTGCAGGGCTATTCAGATTTGACACCTGGGGTCGAGTTCTCTGAAATCATGATGCCTGTTGGCCGGTGA 4140 0.4179 MLYRVGIGNDAQSVEVENAFGSWLDDKSYISGSQYGSVLNIKGRPVSINHTTFTSDDYNYSAPEQLYWTARTMGSNEDANTRYNLTWSFPVDSGFKYLVRLHFCEISLEVTQVNQRVFKVYINNQTAEESMDIVALAGAPYTPLYRDYVVMVPMESERRQDMWIALHPNLESKPKYADAILNGVEIIKLSDSSYNLAASFQLEKEQKEKKVPRVIVVAATLGAILGMFITIFILIRRAWKKTKRETSQVLQFNSTSTSHKKVQVTVDSGQCYQFTLAEISIATSNFSEALVIGEGGFGKVYKGILADADEATHVAIKRSKPSSRQGFKEFQNEINFFSFSHMNLVSLLGYCQEGNELILVYEYMAQGPLCDHLYKKQKQPLPWNLRLKICVGAARGLHYLHTGTRHPMIHRDIKSANILLDQNWVPKIADFGLSKIVPSIYHTHVSTEVKGTFGYLDPEYYKRRKLTEKSDVYSFGVVLFEVLCGRPAVNHVAVEEENEKVGLVDWAMHCHQSGSVDRLIDPHLEGQIRSECLMAFVDIGIQCLTNKSAERPTMGEVLSNLEKILSWQESLEEQDINTTNYVPSENIVLNCGSNTTELVQYDGRNWTGDIASHINSLIATAPPTLQSIPQVPYMTARIFHSQFTYRFNVTPGPKFIRLHFYPASYLDLNISKAFLSVTAGNITLLHNFSVSLNADYFNSAYFMKEFIVHVSGSTLELTFTPSSNASDAYAFVNGIEVISMPLGLYIRGDDAPLPLVGHYPTLVYIYNDSAMENLYRLNVGGEQIQPKYDKAMFRTWDTDDRYLLGANLDFQPFNMSMQVVYKGNVPANSAPEDVYRTSRSMVSFEKGLVNLNYNLTWFFPVDSGFNYLVRLHICEIDYDITKVNEVVFSVFLNNQTAEEQFDPIAASGGSGVAVYRDYVVMAPEDNEGKQDLWLELHPNKKTKPKYYNAFLNGLEIFKLSSVDKNLAGLNPAKRKLESYVKPPSAQIKNSKKLTFILIGCGLGAVVALPILLCLVLYRLKVIRPARIMSCCGLIVLPPNQANKSSFGSHFSLRKIKVATNDFDETLIIGTGGFGSVYKGSFDGGETFIAIKRANPMSEQGVIEFETEVHLLSQLRHNNLVSLLGSCNEDGEMILVYDFMANGTLYDHLHVRQRDQPPLSWTQRLEICIGVARGLHYLHTGTQHRIIHRDIKTTNILLDHNWVAKISDFGLSKASYPSLSTTNVKGSIGYLDPEYYQCHKLTEKSDIYSFGVVLLEVLSARPAVLPDEDDEHVNLAEWAVFCFENDNVEQMVDPNLEGNIVKECFELYLKVAMKCLAEKGVERPSIGDVLQNLVLALQLQKNPGTSRDGNVHRNDNTGLQGYSDLTPGVEFSEIMMPVGR. 1380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01348 1379 Gene3D Phosphorylase Kinase; domain 1 1048 1138 - -
Seca9g01348 1379 FunFam FERONIA receptor-like kinase 769 960 - -
Seca9g01348 1379 FunFam FERONIA receptor-like kinase 586 741 - -
Seca9g01348 1379 FunFam receptor-like protein kinase FERONIA 1036 1138 - -
Seca9g01348 1379 CDD STKc_IRAK 1068 1332 - -
Seca9g01348 1379 Pfam Protein tyrosine and serine/threonine kinase 291 561 IPR001245 GO:0004672|GO:0006468
Seca9g01348 1379 Pfam Protein tyrosine and serine/threonine kinase 1067 1332 IPR001245 GO:0004672|GO:0006468
Seca9g01348 1379 CDD STKc_IRAK 292 564 - -
Seca9g01348 1379 SUPERFAMILY Protein kinase-like (PK-like) 261 562 IPR011009 -
Seca9g01348 1379 SMART serkin_6 286 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01348 1379 SMART serkin_6 1062 1334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01348 1379 FunFam Receptor-like protein kinase FERONIA 364 582 - -
Seca9g01348 1379 PANTHER OS07G0166700 PROTEIN 270 568 IPR045272 GO:0004714|GO:0006468
Seca9g01348 1379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 408 420 IPR008271 GO:0004672|GO:0006468
Seca9g01348 1379 Gene3D Transferase(Phosphotransferase) domain 1 364 586 - -
Seca9g01348 1379 Gene3D Transferase(Phosphotransferase) domain 1 1139 1354 - -
Seca9g01348 1379 Gene3D Phosphorylase Kinase; domain 1 246 363 - -
Seca9g01348 1379 FunFam receptor-like protein kinase FERONIA 247 363 - -
Seca9g01348 1379 FunFam Receptor-like protein kinase FERONIA 1139 1354 - -
Seca9g01348 1379 ProSitePatterns Protein kinases ATP-binding region signature. 292 317 IPR017441 GO:0005524
Seca9g01348 1379 ProSiteProfiles Protein kinase domain profile. 1062 1334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01348 1379 ProSiteProfiles Protein kinase domain profile. 286 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01348 1379 Pfam Malectin-like domain 44 188 IPR024788 -
Seca9g01348 1379 Pfam Malectin-like domain 589 958 IPR024788 -
Seca9g01348 1379 FunFam FERONIA receptor-like kinase 1 190 - -
Seca9g01348 1379 Gene3D - 769 960 - -
Seca9g01348 1379 Gene3D - 587 741 - -
Seca9g01348 1379 Gene3D - 1 190 - -
Seca9g01348 1379 SUPERFAMILY Protein kinase-like (PK-like) 1044 1333 IPR011009 -
Seca9g01348 1379 ProSitePatterns Protein kinases ATP-binding region signature. 1068 1091 IPR017441 GO:0005524
Seca9g01348 1379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1185 1197 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01348 Seca-Chr9 23809787 23814667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01348 2 608 Receptor kinase-like Gene Family AT3G51550 44.930 1.17e-171 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca9g01348 Malectin_like 1.9e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01348 - - gmx:100776859 1239.56