Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01247 ATGGAGTTTGCATCAATTGAAGATGCAAAGAACCACTACACAAGGTATGCAAAGAACAAAGGTTTTAGTTTTCGCATGGGTCGTGTTACTAAATCAAGAACAAATGGCATGATAATTGGCCAGGAGATCCTTTGTTCAAAGGAAGGGTTTCGAAATGAAACAAGAGTGGGATGCAAGGCAGTGTTATATATAAAGAAAAATGAAGATGGATGGATTGTTTCTAGATTTGTTAGAGACCATAATCATGAATTGTTCTCCCCAAGGAGTTCAAAGTTTCTTCGAGTGCATAGAAAGAAAACTAAGGTGCAAAAAAAGAGTGGTGGTATAGATAATGCTGGATTTAGTCAACAAGATGTTATTAATTACTTGAGTCAAAAAAGACAAAAGCAATTAGAAAAAGGAGATGCTCAGTTGATGTTATCGTATTTCAAGAATTGTCAATTGAAAAATACTGGATTTTTTTATGCATTTCAAATGGATGCAGAAGGACAATTAGCAAATTGTTTTTGGGTTGATTCAAGGTCTAGAATTGCTTTCAAATATTTTGGTGATGTGGTGACTTTTGATCCAACATACTTAACAAATAGATACAAAATGCCTTTTGTTCCTTTCACAGGTGTGAATCATCATCAGCAATCCATTCTTTTTGGTTGTGCTCTATTATGGGATGAAACTGAAGAGAGTTTTGTTTGGTTGTTGAGTACTTGGTTAGAAGCAATGTCTGGTGTTTGTCCTAAAACTATCATCACAGACCAAGACACTGCTATTACTAATGCGGTTGCAAGGGTGTTTCCAGGGGTCAATCACCATTATTGTATGTGGCACATTGAGAAAAAGGTTCCAGAGTACTTAAACCATGTTTATCATGAACACGGTGAGTTTAAAAATCAATTCCACAAGTGCATCCACCAATCTATCACAGTTGAAGAATTTGAATCTGATTGGGAAGCGATGATAGATAAATATGGGTTGCAAGATAATCAGTGGCTAGAGAAGATATACTCTATTCGAGAAAAATGGATTCCTGCTTATGTACGTCATAACTTTTGTGTTGGAATGTCGACCACCCAAAGGAGCGAAAGTATGAATAAGTTATTTAAGGATTATTTGAATTCAAGCACTCCATTGAGCAAATTTGTGACACAATATGAGAAGGCTCTTGATGCACGTTATAACAAGGAAAGAGAGAAGACTTTCAAGACAATGAACTCAAAACCATTTTTGCGAACCTTATATCCCATAGAAGAAGAAGCTTCAAAAAGTTATACAAGAAAGTTGTTTAGGATATTCCATGATGAGTTGGTTGGCTCTCAGATGTTTACTGCAGAGAAAGTTGGGTTTTCTAATGAAGTGTCCACTTACAAGGTTCATGAAATTCAAAAAGAAAAGCCTAACTATTATGTGAGTTTTCATATCATTTCAAAGGAAGCAAATTGCACTTGTCACAAGTTTGAATTTTTAGGTATTCTATGTAGACATGTGTTAGTTGTATTCCTAAAGAAAAGGATTTATTCACTCCCTTCACAGTATATTCTACATCGATGGACCATTAATGCCAAGAAGGAGAAAATTAATGGATTGGCAAGGGAAGAATTCCAGGAGGGCAGCAACAAAGCTTCAAGTACTCTATTGTTCAATAATGCTATGGTTAAATCTCTTGAACTACTTGAAAGAGCTTCACGATCAATAAAACACCATGATGTTGCAATTCAAGGCTTAGAACAGTTAATTGGAGAACTTGATTTATTGGAAGTTGATGAATCAAACGAAGAGTTTGGTAATTTGACAACTAAGTCATCCCAGAAGTCTCCAACAATGCTTTAA 1824 0.3542 MEFASIEDAKNHYTRYAKNKGFSFRMGRVTKSRTNGMIIGQEILCSKEGFRNETRVGCKAVLYIKKNEDGWIVSRFVRDHNHELFSPRSSKFLRVHRKKTKVQKKSGGIDNAGFSQQDVINYLSQKRQKQLEKGDAQLMLSYFKNCQLKNTGFFYAFQMDAEGQLANCFWVDSRSRIAFKYFGDVVTFDPTYLTNRYKMPFVPFTGVNHHQQSILFGCALLWDETEESFVWLLSTWLEAMSGVCPKTIITDQDTAITNAVARVFPGVNHHYCMWHIEKKVPEYLNHVYHEHGEFKNQFHKCIHQSITVEEFESDWEAMIDKYGLQDNQWLEKIYSIREKWIPAYVRHNFCVGMSTTQRSESMNKLFKDYLNSSTPLSKFVTQYEKALDARYNKEREKTFKTMNSKPFLRTLYPIEEEASKSYTRKLFRIFHDELVGSQMFTAEKVGFSNEVSTYKVHEIQKEKPNYYVSFHIISKEANCTCHKFEFLGILCRHVLVVFLKKRIYSLPSQYILHRWTINAKKEKINGLAREEFQEGSNKASSTLLFNNAMVKSLELLERASRSIKHHDVAIQGLEQLIGELDLLEVDESNEEFGNLTTKSSQKSPTML. 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01247 607 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 577 IPR031052 GO:0006355
Seca9g01247 607 Pfam MULE transposase domain 185 279 IPR018289 -
Seca9g01247 607 ProSiteProfiles Zinc finger SWIM-type profile. 466 502 IPR007527 GO:0008270
Seca9g01247 607 Pfam SWIM zinc finger 476 501 IPR007527 GO:0008270
Seca9g01247 607 Pfam FAR1 DNA-binding domain 12 85 IPR004330 -
Seca9g01247 607 SMART 26again6 477 504 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01247 Seca-Chr9 22223351 22225284 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g01247 MULE 2.5e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01247 - - tpra:123904109 978.393