Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01239 ATGATGCCCCCTCAGCAAGAAACCACTATTACACCAAACATTCTCGCCATCCCGAACCGACCAGAGAACCGCTCCATCCATGCCGAACCACCAGGTTCCTCCACTAAACCAACATCACATATCAATCACATTCCTTCTCAACAGCAGCACCAACCACCACCATCAAAACTTTCCATTCTTCACCAATCCCTGCGTCCTATTACCCTCAAATTTGAAGATGTTTGTTACAGCATAACCGTTGGAAACCAGAAGAATGGTTGTGTTTGCGTTCCTCCTTCTTCTTCAAGAGAGCCAAAGCTAACACGTGCAGTGCTGAACGGTGTCACTGGGATTGTGAAGCCAGGAGAGGTGATGGCAATGCTCGGTCCATCAGGTAGCGGCAAGACCACCTTACTCACCGCCCTCGCCGGCCGCCTCACCGGAAAACTCTCCGGCGACATCACCTACAACGGCCAACCTTTCTCCGGCGCCATTAGGCGCAGCACAGGGTTTGTGTCCCAAGATGACTTGTTGTACCCTCACCTTACCGTGATAGAGACCCTCTCCTACGCTGCTCTGTTGAGACTTCCCAAGAGCCTCACAAGGGAAGAGAAAATGGAGCACGTGGAAATGATCATATCGGAGTTAGGGCTTTCCCGGTGCCGGAACAGCCCCGTTGGCGGCGGGACAGCCTTGTTCCGGGGAATTTCCGGCGGGGAGAGGAAGCGGGTCAGTATCGGGCAGGAGATGTTGATCAACCCGAGTTTGTTGTTGCTGGATGAGCCCACTTCTGGGCTCGATGCCACCACGGCCCAGCGCATCGTGGCGGTGCTTCGAAGCCTCGCCAGCGGTGGCCGGACCGTGGTGACCACTATTCACCAGCCTTCCAGCCGGTTATACAGGATGTTTGATAAGGTGGTTGTGCTTTCGGACGGGTACCCGATTTATAGTGGGCAAGCGGGTCGGGTCATGGATTATCTCGAGTCCGTTGGATTTGTGCCCGCTTTCAATTTCGTCAACCCGGCTGATTTTCTGCTTGACCTTGCTAATGGCATAGTTGCTGATATCAAACCAAATGATAAGATAGATGAGGATCAAGCTTCAATCAAACAGTCCCTAGTTTCATCCTATAAGAAGAATTTATACCCTCTTCTCAAAGAAGAGATTCAGCAGAATACTAGAGACCCAACATCTTTTACTACAGGAACACACAGAAATTTTTATGCATGTTTTGTAGGTTCTGAGAACCAATGGACCACTACCTGGTGGGAGCAATTCAAGGTTCTGCTTAAGAGCAGTTTAAAGGAGAGGAGGCATGAATCTTATTCTGGCTTAAGGATTTTCCAAGTCTTTTCTGTCTCAATTCTCTCTGGACTTCTGTGGTGGCATTCTGATCCCTCACATATACAAGATCAGGTAGGCCTGCTTTTCTTCTTCTCCATCTTCTGGGGATTCTTCCCTCTCTTCAATTCCATCTTTGCATTTCCTCTGGACCGGCCAATGCTGATGAAGGAACGATCATCAGGCATGTATCATCTCTCCTCCTACTATGTTGCTCGCATGGTTGGGGACTTACCAATGGAGCTTGTGCTTCCAACTATCTTTGTAACTATTGCCTACTGGATGGGTGGTCTCAAGCCTTCACTGGTCACATTTGTGTTAACCCTCTTGATCATGCTTTTTAATGTGCTAGTCTCTCAAGGAATAGGCCTGGCACTTGGGGCCATTCTAATGGATGTGAAACAGGCCACAACTCTAGCTTCAGTGACTATGCTGGTGTTTCTTTTAGCTGGTGGTTACTATGTTCAGCAAATGCCATCTTTTATAGCTTGGTTGAAGTACATTTCTTTCAGTCATTACTGCTATAAGCTCTTGGTAGGAGTGCAGTACTCAGTAAATGAGGTTTATGAGTGTGGACCAGGGTTACATTGTAGGGTAAGAGATTTTCCTGCCATAAAGTGTCTTGGGCTTGACAGCATGTGGGCTGATGTGGCTGTATTGGCTATAATGTTGATCGGATACAGAGTTGTGGCTTACCTAGCTTTGAGGATGGGGCTGCATCACTGA 2046 0.4853 MMPPQQETTITPNILAIPNRPENRSIHAEPPGSSTKPTSHINHIPSQQQHQPPPSKLSILHQSLRPITLKFEDVCYSITVGNQKNGCVCVPPSSSREPKLTRAVLNGVTGIVKPGEVMAMLGPSGSGKTTLLTALAGRLTGKLSGDITYNGQPFSGAIRRSTGFVSQDDLLYPHLTVIETLSYAALLRLPKSLTREEKMEHVEMIISELGLSRCRNSPVGGGTALFRGISGGERKRVSIGQEMLINPSLLLLDEPTSGLDATTAQRIVAVLRSLASGGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGQAGRVMDYLESVGFVPAFNFVNPADFLLDLANGIVADIKPNDKIDEDQASIKQSLVSSYKKNLYPLLKEEIQQNTRDPTSFTTGTHRNFYACFVGSENQWTTTWWEQFKVLLKSSLKERRHESYSGLRIFQVFSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNSIFAFPLDRPMLMKERSSGMYHLSSYYVARMVGDLPMELVLPTIFVTIAYWMGGLKPSLVTFVLTLLIMLFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYVQQMPSFIAWLKYISFSHYCYKLLVGVQYSVNEVYECGPGLHCRVRDFPAIKCLGLDSMWADVAVLAIMLIGYRVVAYLALRMGLHH. 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01239 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 47 672 - -
Seca9g01239 681 MobiDBLite consensus disorder prediction 28 56 - -
Seca9g01239 681 CDD ABCG_EPDR 66 311 - -
Seca9g01239 681 SMART AAA_5 114 307 IPR003593 GO:0016887
Seca9g01239 681 Pfam ABC transporter 105 257 IPR003439 GO:0005524
Seca9g01239 681 MobiDBLite consensus disorder prediction 1 56 - -
Seca9g01239 681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 69 329 IPR003439 GO:0005524
Seca9g01239 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 322 IPR027417 -
Seca9g01239 681 ProSitePatterns ABC transporters family signature. 229 243 IPR017871 GO:0005524|GO:0016887
Seca9g01239 681 FunFam ABC transporter G family member 22 93 323 - -
Seca9g01239 681 MobiDBLite consensus disorder prediction 1 18 - -
Seca9g01239 681 Pfam ABC-2 type transporter 417 623 IPR013525 GO:0016020|GO:0140359
Seca9g01239 681 Gene3D - 68 324 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01239 Seca-Chr9 22110990 22114510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01239 104 305 Calmodulin-binding Proteins AT2G36910 31.579 1.70e-12 69.3