Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca9g01218 | ATGGCCACTGTCCCTCCTTCACTTCTCTTCTTTGCAAGACTTTCAGGTCTTGCAGTAGCACTTCTTGTCCTCTTCTGGACTTTTGCCTTCAAGTCTAGCTTCCTCCCTTCCTCCCTCTCCCAGCAAGATCTCATCTATGCAGCTCTTCATCCTGTGCTGATGGTCATTGGGTTTATCCTCTTAAGTGGAGAAGCAATTTTGGTGCATAGATGGTTGCCTGGTTCAAGGGGATTGAAGAAATCGGTGCACTTGTGCCTTCAAGGGGTGGCTCTAGGTTCTGGGATCTTTGGGATTTGGACAAAATTCCAAGGAAAGGATGGGATTGTGGCAAATTTCTATAGCCTGCATTCTTGGATGGGTTTGATCTGTGTATCCCTCTTTGGAGCTCAGCAGTGGTTGATGGGCTTCTTGAACTTTTGGCACCGAGGAGAGGTGCGCACAGTGAGGATAAGGATCTTACCTTGGCATGTATTCCTTGGCCTATACACTTATGCATTGGCAGTGGCAACTGCAGAAACTGGGTTGCTAGAAAAGTTGACATTTTTGCAAACAAAGAGAAATGTATCCAGACACAGCACTGAGTCCATGGTGGTTAATAGTTTAGGCCTCGGTCTTGCCCTTCTCAGTGGCTTTGTTATTTTGGCTGCTGTTTCACCTAAGTATCAAACCAAAGTTTTCTACTCAGATACCAGGTGTTTGTCATCTTAA | 708 | 0.4576 | MATVPPSLLFFARLSGLAVALLVLFWTFAFKSSFLPSSLSQQDLIYAALHPVLMVIGFILLSGEAILVHRWLPGSRGLKKSVHLCLQGVALGSGIFGIWTKFQGKDGIVANFYSLHSWMGLICVSLFGAQQWLMGFLNFWHRGEVRTVRIRILPWHVFLGLYTYALAVATAETGLLEKLTFLQTKRNVSRHSTESMVVNSLGLGLALLSGFVILAAVSPKYQTKVFYSDTRCLSS. | 236 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca9g01218 | 235 | ProSiteProfiles | Cytochrome b561 domain profile. | 11 | 217 | IPR006593 | - | |
| Seca9g01218 | 235 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| Seca9g01218 | 235 | FunFam | Cytochrome b reductase 1 | 2 | 225 | - | - | |
| Seca9g01218 | 235 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Seca9g01218 | 235 | Gene3D | - | 4 | 226 | - | - | |
| Seca9g01218 | 235 | CDD | Cyt_b561_ACYB-1_like | 49 | 183 | - | - | |
| Seca9g01218 | 235 | PANTHER | CYTOCHROME B561-RELATED | 7 | 220 | IPR043205 | GO:0016491 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca9g01218 | Seca-Chr9 | 21926582 | 21929016 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Seca9g01218 | 1 | 235 | Chloroplast and Mitochondria Gene Families | AT1G26100 | 65.041 | 1.77e-96 | 280 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca9g01218 | K08360 | - | gmx:100781811 | 392.889 |