Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01214 ATGTCTGTAATCATTGTGAACATAGAGTTTTTCTCAACAGGGCAATTTGATTGCGATTCCCAGAGTGTGTTTGCTCCAGCTTGTATCAGTCCTGGAAAGATGGATAATCTGTATGAAGTTCCAATTTATAATTTAGATGATGACAAAGATATGGGCAATGCTGATGGTTGTAATGATAGTGTTAGTGGAGATTGTACTAATAATGATGAAGCAAATGATAGTGGTGATAGAGAATCTAATAGTAATGGAGATTCCCATAATAATGATGAAAGAAATGACCCACCAATGGTTGATGTTGGAGGTGATGTGTGTAAAAGGATTACAGAATTGACTGTTGATGATATACTAGGATTAGAGTTTGGATCTCAAAATGAAGGATATGAATTTTACAGTCAATATGCTAAAGCTATTGGATTTGTGATAAGGAAAGATGACATTAAAAAGGATGTTAGGGGTGACATTAAAAAGGATGTTAGGTGTAACATTGTAATGCGGCAGTTTGTATGCAACAGAGAAGGGCTGAGGAAAAAAAGGCATTTGATGAGGTTAGATAGAAAAAGGGAACATAGAGCAATCACTCGCAGTAATTGTGAAGCTAAATTACGAATACGCTTCAATCGAAAGAAATCAAATTGGAGAGTTGTTTCCTTTGAGGAGTCTCATAACCATGAGTTAACCCCACCTAGGTTTATGCATTTACATTCTGCATATCGTAAGTTAACGGATGGAGATAAGGCTCAAGTGGATAGCTTACATGCTCATGGTGTGAGAACGTGTCACATTATGGGTTACATGTTGGCTCAAAAATGGGGGTACAGTAATGACAAAAATGAAATGGAATTTGATGTATCTAACACTTTTAGCCCTGTACCTTCACAAATTTCCAGTGGTCGAAACATTAAAAAAGGGAAGGAGAAGGTTGATCCTGTTAGTACTAGTAAGGTGAAAAAGGTAAAGGAGAAAAAGGAAAAAGACTCAACTCAAAAAAAGTCGAATGAAGTTAAAATTGAGTCAATGAGTTATTTTAGTGGAGGAATGCCTAATTTTCATCAAGGAGGTTGTTCTAGCGGAGTAATGCCTAATTTTCCAGAAGGTGCGTCTATGTTTCCGCAAATGAGATTTCCCTCATATGGTTATGGCTCAATGAATCATGGTGTTTCCATGATGCCTCATTATGATGGAGTTCACTGTTACCCTCAAAATGGTGGAGTTCCATTATTCCCTCAACATCATCAGTATTTTAGTCAAATCCCAAGTGTACATAATGGGTCATCATGGCATAATTTGCTTCAACATGTATCCCAAAATAGGGGTGCCCGCAGCTCTAACAATTTGAGACCTATTCCTCGTGGGGCATGA 1359 0.3745 MSVIIVNIEFFSTGQFDCDSQSVFAPACISPGKMDNLYEVPIYNLDDDKDMGNADGCNDSVSGDCTNNDEANDSGDRESNSNGDSHNNDERNDPPMVDVGGDVCKRITELTVDDILGLEFGSQNEGYEFYSQYAKAIGFVIRKDDIKKDVRGDIKKDVRCNIVMRQFVCNREGLRKKRHLMRLDRKREHRAITRSNCEAKLRIRFNRKKSNWRVVSFEESHNHELTPPRFMHLHSAYRKLTDGDKAQVDSLHAHGVRTCHIMGYMLAQKWGYSNDKNEMEFDVSNTFSPVPSQISSGRNIKKGKEKVDPVSTSKVKKVKEKKEKDSTQKKSNEVKIESMSYFSGGMPNFHQGGCSSGVMPNFPEGASMFPQMRFPSYGYGSMNHGVSMMPHYDGVHCYPQNGGVPLFPQHHQYFSQIPSVHNGSSWHNLLQHVSQNRGARSSNNLRPIPRGA. 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01214 452 MobiDBLite consensus disorder prediction 56 98 - -
Seca9g01214 452 Pfam FAR1 DNA-binding domain 128 226 IPR004330 -
Seca9g01214 452 MobiDBLite consensus disorder prediction 299 332 - -
Seca9g01214 452 MobiDBLite consensus disorder prediction 70 96 - -
Seca9g01214 452 MobiDBLite consensus disorder prediction 291 332 - -
Seca9g01214 452 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 65 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01214 Seca-Chr9 21865779 21869903 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g01214 FAR1 1e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01214 - - ccaj:109792835 235.343