Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01203 ATGGCAATCCCTGGTTTACGCACTGATAATAGCCTCATACAATTCAACCGTCAATTAAAGAGGTGTGACTATGACTTGGTTGCATGGAGAAAAACTGTAGAGTCTCGATGTAGCCCTGATCTTAGAAGGGGCTTTGAGCTATTGGATTTAGATGGTGGAATAGGATGGGAACTTCTGACATCAATGGTTCGATACAAAGCAAGGCAAAGGCTGAGTGCAAAAGCAGCATTAGCTCATCCTTACTTTGACAGAGAAGGCTTGTTGGCATTGTCTTTCATGCAAAATCTGAGGCTGCAGCTCTTACGAGCAACTCAGCAGGATTATGGAGAAGCTGCCAAATGGATTACTTATCTTATGGCAAAATCCGGAACAGAGAAGGATGGTGGATTTACTGAAGCTCAGCTCCAGGAGCTGAGAGAAATTGAACCCAGGAAGAAGGCTAGTGCACAGAGAAATGCTCTAGCTTCAGCTCTTAAACTTCAGAGGAAAATTCTAAAAACCTTAAATGAGAGTATGGATGAGCTCAACAGACGCAGGAAAAGCCTTTGGTGGAGCAGATGGATCCCAAGAGAGGAATGA 579 0.4387 MAIPGLRTDNSLIQFNRQLKRCDYDLVAWRKTVESRCSPDLRRGFELLDLDGGIGWELLTSMVRYKARQRLSAKAALAHPYFDREGLLALSFMQNLRLQLLRATQQDYGEAAKWITYLMAKSGTEKDGGFTEAQLQELREIEPRKKASAQRNALASALKLQRKILKTLNESMDELNRRRKSLWWSRWIPREE. 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01203 192 Coils Coil 158 178 - -
Seca9g01203 192 Gene3D Transferase(Phosphotransferase) domain 1 1 87 - -
Seca9g01203 192 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01203 Seca-Chr9 21642086 21643225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01203 55 83 Core Cell Cycle Gene Families AT2G38620 62.069 8.67e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01203 - - ini:109164127 343.199