Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01197 ATGCCGTCAAGGTGCACTGAGGAGTTCCGTCTGAGGAAGGTCAAGAACGATCAACTCAAGGCTGAAGCTAAGGTTAAGGGTGAGGTAATCAGCACCAAGAGACAACCTCAAGGTCCTAAACCAGGTTTCATGGTTGAAGGAGCTACATTGGATACTGTTACTCCAATTCCTTATGATGTCGTAAATGACCTTAAGGGAGGATACTAG 207 0.4589 MPSRCTEEFRLRKVKNDQLKAEAKVKGEVISTKRQPQGPKPGFMVEGATLDTVTPIPYDVVNDLKGGY. 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01197 68 Gene3D - 3 60 - -
Seca9g01197 68 FunFam 60S ribosomal protein L21 3 62 - -
Seca9g01197 68 PANTHER 60S RIBOSOMAL PROTEIN L21 2 67 IPR001147 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01197 Seca-Chr9 21526103 21526309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01197 3 68 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 83.333 2.20e-36 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01197 K02889 - gmx:100500046 137.502