Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01138 ATGCATATACAAACACATCAGGAGAAAGAGATAGAAAACGTGAATGTGCTAAACTCATGCGTAAAAGCAAAGGTTAAACGGGTGGTTCTCACATCTTCATGTTCTTACATAAGATACTGTGATGATATGCAACAAGTCTCTCCTCTTAATGAATCTCACTGGAGTGATCCAGAATACTGCAAACGCCATACTCTGTGGTATTCATATGCAAAGACATACACAGGAACAGTGAATGTGCTAAACTCCTGCGTAAAAGCAAAGGTGAAACGGGTGGTGCTCACATCTTCATGTTCTTCCATAACATACCGTGATGATATGCAACAAATCTCCCCTCTTAATGAATGTCACTGGAGTGATACAGAATACTGTAAACGCCATAATGTAATGAATAACACTTGTTCCTATCTAATATTATGA 417 0.3837 MHIQTHQEKEIENVNVLNSCVKAKVKRVVLTSSCSYIRYCDDMQQVSPLNESHWSDPEYCKRHTLWYSYAKTYTGTVNVLNSCVKAKVKRVVLTSSCSSITYRDDMQQISPLNECHWSDTEYCKRHNVMNNTCSYLIL. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01138 138 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 73 128 IPR036291 -
Seca9g01138 138 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 15 72 - -
Seca9g01138 138 Gene3D - 11 73 - -
Seca9g01138 138 Gene3D - 74 135 - -
Seca9g01138 138 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 14 73 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01138 Seca-Chr9 20825984 20826539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01138 14 72 Monolignol Biosynthesis Gene Families AT2G02400 38.983 3.39e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01138 - - lja:Lj2g3v1154120.1 111.309