Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01121 ATGAGCCTGAACGCCAGATATTATTGTCAAGCTTATCAGACAAAAGAATGTTTCACTAGACTCCTGACAGCCACCAAAAATCTAGTTGTAGCTGACCAAAACCTCCAGTGGAAGATGTTTCTGGCAATATATCTAGACTTTAGGATCTGTAAAGTTTACTTTGGCATGCTTGACGCTCTACTGGCTTCTGAGGAACTCCCAGAAGAATATCGGAATCGATATCAGGATATACTCTGTAATGACTGCCATAAGAAGGGGACTGCTCCATTCCATTGGCTATATCACAAATGTGGGTTTTGCGGATCTTACAACACAAGTGTACAAAAAGCACCTAAAGGCAGCGCTCGACATGACAGATTGACAATAGGGCTACGACAAAGGATGCCAAAGGATGGTGGCTGCAGAAGGGACTCCGACGCTCAAGTCAACAGATTGTCAAAATGA 444 0.4347 MSLNARYYCQAYQTKECFTRLLTATKNLVVADQNLQWKMFLAIYLDFRICKVYFGMLDALLASEELPEEYRNRYQDILCNDCHKKGTAPFHWLYHKCGFCGSYNTSVQKAPKGSARHDRLTIGLRQRMPKDGGCRRDSDAQVNRLSK. 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01121 147 MobiDBLite consensus disorder prediction 128 147 - -
Seca9g01121 147 Pfam Zinc-ribbon 52 105 IPR039512 -
Seca9g01121 147 Gene3D - 72 112 - -
Seca9g01121 147 FunFam RING finger and CHY zinc finger domain-containing protein 1 72 117 - -
Seca9g01121 147 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 50 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01121 Seca-Chr9 20579078 20580286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01121 52 110 C2H2 Transcription Factor Family AT3G18290 81.356 8.43e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01121 K16276 - gmx:100783072 120.553