Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01114 ATGTTTAACCAATGCTCAATTTATTCAGGAGAGCGAGAGATAACTCATCACAAGTTAGTGGTTATAGTGGCAACAGTTTGTGCAGCTTTAGGAGTTGCACTTTTAATGATCGTAATCTACTACTTTAGAGGGAGATTATGGAAAGAAGAATGTAAAGCTCATCAAGAATTTGAGGCTTTTCTCAGGAATCATGGACCGCTTGCTGTGAGAAGATATAGTTACTTGGACATAAAGAAAATGACCAGTTCCTTTGTAGAAAAATTAGGCCAAGGAGGATATGGAGTTGTTTATAAAGGGAAGTTGCATGATGAAAGTATAGTTGCTGTGAAGGTATTGAATAACTTAAAAGGTAATGGGGAGGAATTCATCAATGAGGTAGCAAGCATTAGTAGAACTTCTCATGTTAATATTATCACTCTATTAGGATTTTGTTTTGAAGGATCTAAGAGAGCATTGGTCTATGAGTTCATGTCTAATGGATCTTTGGAGAAGTTCATATATGGAAATAATCCAATGGAAAAAGATAACCAATTGAATTGTGAAACATTATACCAAATTGCAATAGGTGTTGCTCAAGGATTGGAATATTTGCACAGAGGATGTAATACTCGAATCTTCCATTTTGACATGAAGCCTCATAACATATTGTTGGATGAGAACTTCTATCCCAAGATCTCAGATTTTGGACTCGCTAAAATATGTCCTAAAAATGAGAGCAAGGTATCCATGTTTGGAGCTAGAGGAACCCCAGGATACATTGCTCCTGAGGTATTTTCAAGAAATTTTGGAATGGTCTCTCACAAGTCAGATGTTTATAGCTTTGGAATGATGGTTTTAGAAATGGTGGGGGGAAGACAAAATATTAATATTGATGTTGATTGTACTAGTGAAATTTATTTTCCTTATTGGATTTATAAGCGTATAGAAGCAAATGAAGAGCTTGCACTTAGAAACATTACCAATGAAAGTGACAGAGAAAGGATGAGAAAGATGGTCATAGTAAGCTTGTGGTGCATCCAAACTAATCAATCAGACCGTCCAACAATGCGTACAGTGGTGGAGATGCTTGAAGGGAGAATTGAGAACTTGACAATGCCACCAAAACCGTTCCTGTCATCTCCTTCAGGTTCTATGCGCCATTCTTCAACAGATTGA 1155 0.368 MFNQCSIYSGEREITHHKLVVIVATVCAALGVALLMIVIYYFRGRLWKEECKAHQEFEAFLRNHGPLAVRRYSYLDIKKMTSSFVEKLGQGGYGVVYKGKLHDESIVAVKVLNNLKGNGEEFINEVASISRTSHVNIITLLGFCFEGSKRALVYEFMSNGSLEKFIYGNNPMEKDNQLNCETLYQIAIGVAQGLEYLHRGCNTRIFHFDMKPHNILLDENFYPKISDFGLAKICPKNESKVSMFGARGTPGYIAPEVFSRNFGMVSHKSDVYSFGMMVLEMVGGRQNINIDVDCTSEIYFPYWIYKRIEANEELALRNITNESDRERMRKMVIVSLWCIQTNQSDRPTMRTVVEMLEGRIENLTMPPKPFLSSPSGSMRHSSTD. 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01114 384 Gene3D Transferase(Phosphotransferase) domain 1 157 365 - -
Seca9g01114 384 ProSitePatterns Protein kinases ATP-binding region signature. 88 110 IPR017441 GO:0005524
Seca9g01114 384 Gene3D Phosphorylase Kinase; domain 1 57 156 - -
Seca9g01114 384 Pfam Protein kinase domain 85 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01114 384 PANTHER RUST RESISTANCE KINASE LR10-RELATED 54 375 IPR045874 GO:0004672
Seca9g01114 384 SUPERFAMILY Protein kinase-like (PK-like) 66 357 IPR011009 -
Seca9g01114 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Seca9g01114 384 FunFam S-receptor-like serine/threonine-protein kinase 50 156 - -
Seca9g01114 384 SMART serkin_6 82 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01114 384 ProSiteProfiles Protein kinase domain profile. 82 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01114 384 FunFam PR5-like receptor kinase 157 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01114 Seca-Chr9 20531995 20533323 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01114 28 371 Receptor kinase-like Gene Family AT4G18250 53.390 4.78e-120 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Seca9g01114 Pkinase 7.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01114 - - lang:109359375 551.592