Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01108 ATGATTTATATTGTATTCTTCTTTTGGATGGCTGGCCACTCTGTGTTTGATTTCCTTTCTCTACTGTGTCTGTGTTGTGTTCTGCTTCTTCCATCGGCTGCAACTCAAGGGGAAGAAAATGAGGAATGTCCGCCACCTCGTCCTTGTGGACATCTCGGGGATATCTCCTTCCCCTTCACCACCTCTACGAATCCAGAATGTGGCTTCCAAATAAGAGGTTGTGAAGACAACGCTGCAGGTAAAGAAATCCATCTAGAAAACCGAATTTATAAAATTGAAAGCATCTATCAGCATGAAGGTGAAATGTTATATTCAATTTTCATCGACAACGACCATGACACTCAATTTCATCCAGAGTATCATCTCAATAAGTCTTTTGATATCAACTTTCTTAACTTCTCCATATGCTGTCATAGCTCTACCCCTGAACCGCCCATGTCAGAACACAGAAACTGTCCTTCCTATGACATCTACTATGGAAGTTCTCAACATCCTGATCTCAAGTTGCCCTTTCTTCCATCATTTGCAGGCTTACCTGTTCAGCTTCCAAAACCTTATTCCCCTGAACAATGTGTGTCCTCAATTTTGTTTCTCGAAATTGAAGTAAAATTGAAGCATTGTGAAGACTGTTATTATCTTACAAAAAGTTGTCGACTTCACCATGAAAATTTCACATGTTTCGATGGTAAACAAATGGCCTCTCCTGATGCTGGAACAAATGGCAACGAAAAACATTTGAAGGCTGCTATAATAGGTTTATCTATTGGATTAGCAACAGTGATTACGCTTGCCTTGCTTGCCATTCTTTTTCTGTACAAACCAATAAACAAGTCTTCAGCAGTCCAAAACCAACCAAGAAACACTTATTCTGGTCCCTACAGAAGTACAACAAACCCAGCAAGTGGAGCTGTCTACTTTGGGATCCCTGTCTTCTCCTATGAGGAGCTCCAAGAGGCAACAAATAATTTTGATCCAGCTAGAGAGCTTGGAGAAGGAGGCTTTGGAACTGTTTACCATGGAAAGCTTCGAGATGGACGTGAAGTTGCAGTGAAGCGCCTATTTGAGCGCAACTACAGGCCAGTGGAATCATTCAACAATGAAATTCAGATTCTCACACGCATGCGCCACACAAATCTTGTGTCCCTCTATGGCTGCACTTCACGTCACAGTCGTGAGTTGCTGCTAGTATATGAATACATCCCAAATGGCACACTTAGTTGCCATCTACATGGTGATAGGGGGAAACATGGCTTATTGCCATGGCCTGTGAGAATGAAAATTGCCATAGAGACTGCTGGTGCATTGGCTTATCTCCATGCTTCTGACATCATTCACCGAGATGTCAAATCCAGCAACATTCTCCTTGACAATAACTTCTGTGTTAAAGTTGCAGATTTTGGACTTTCAAGACTATTCCCCATTGATGCCACACATGTCTCCACAGCTCCAAGGGGAACCCCAGGTTATGTTGACCCAGACTATCGCATATGCTACCAGCTTACAAGCAAGAGTGATGTGTATAGCTTTGGAGTTGTTCTTGTTGAGCTAATATCATCTTTGCCAGCAGTTGACATGGCCAGGGACAGGGATGAGATTAAGTTGGCAAATCTAGCCATAAGGAGGATTCAAAGAGGGGCGTTTTATGGAAAGAAATACAACCAAAGGAACTGCCCAACATCTTTTCATTGCGGGAAATTCGGAGACATCCAGTTCCCATCCACCAACAAAAACAACCTGGACTGTGGTTTGCCCATAAGGGGCTGTGATGATCAAAATGCAGCAACAGAAGTCCAGTTATCAAACCAAACATGGTATGAATTTGAATCCATAAATGGAAACAATTCAATTTCTGTCATAGACCATAAGCTTCAAAGGCTCTTGGCCTCTAGATGTTGCAATGCCTTCACTTATAATATTAATGCTACCCTTACTCCGAGCACTCCTGTACTGCATTTTCAGATCGAAATGGAACACAGTATAACACTGTTAAGATGCAGACACGCTTCTTATAGACCTAGCAATAAATACATAAAGTATACAAGCTGTAATGGCTACGATATCTACTATCCTACTCAATCTCCTGAAATAGATGACATGTATACAGGCTCTGAAAATGCATGTTCAACCATCCAGCTTCCAATTAAATCATCGCCCATGGACTATTCTACAGGCACAGCCCTTTACAATTTGTTAACAGCTGGATTCCGCATAATATTATTGTTATCGGAGGATTGTGGTAAGTGCTATGAAAATGGAGGCCAATGTCAAGTTGACAAAGAATCATTATATTGTGCCGGTTCCAAAGAACAAGCAGATCCTCCTCAGCCGAGAAAAGCAGATCCTCCGGTACAAGCAGTTTCTCATGATCAACAGAAATGTCCTAACTTAAATCCAATCCCAGAGAGTGGCGATGCCTTCTTAGGGATCCCTGTCTTCTCCTATACAGAGCTTGAGAAAGCAACAAACAAATTTGACGAAGCTAGAGAACTTGGAAGTGGAGGCTATGGGAATGTTTACTATGGAACGCTCCATGATGGACGGGAAGTTGCTGTCAAGCGCCTATATGAGCACAACTACAGACAAGTGGAGCAGTTCATGAATGAAATAGAGATCCTTACACGTCTGCACCACAGAAATCATGTGTCCCTTTATGGCTGCAGTTCTCGGCACAGCCGTCAACTACTGCTTGTGTATGAATATATTCCAAATGGCACGGTTGTTTGTCATCTCCATGGTGATTTAGCAAAGGATGGCTTCTTGTCATGGCCTATACGAATGAAAATTGCCATATCAGCAAACTTTGGGCTTTCAAGACTGTTCCCCAACAATGTCACCCATGTGTCCACAGCTCCACAAGGAACCCTGGGTTATGTGGACCCAGAATATCACCAATGCTACCAGCTAACAAGCAAGAGTGATGTATATAGTTTTAGGGTTGTGCTTATTGAGTTAATATCATCTCTGCAAGCAGTTGATATAACCAGAGAAACGGATGAGATTAACTTGTCAAATCTAGCCATAAAGAAGATCCAAAAGCGCGCATTCTGTGAACTGGTAGATCCTTCCCTTGGCTTTGAGTTAGATCAACAATTTAAAAGGAAAATAGTTTCAGTAGCAGAATTGGCGTTTCAGTGTTTGAAAGAGTACAAGCATTTGAGACCTTCAATGGTAGAAGTTTTGGAGGAGCTGAAGAGAATTGATGCTGGGGAGGATATGCCAAAGAATATAAAGGAAGCAGATGTTAACCTCCCAGTGTAA 3258 0.4205 MIYIVFFFWMAGHSVFDFLSLLCLCCVLLLPSAATQGEENEECPPPRPCGHLGDISFPFTTSTNPECGFQIRGCEDNAAGKEIHLENRIYKIESIYQHEGEMLYSIFIDNDHDTQFHPEYHLNKSFDINFLNFSICCHSSTPEPPMSEHRNCPSYDIYYGSSQHPDLKLPFLPSFAGLPVQLPKPYSPEQCVSSILFLEIEVKLKHCEDCYYLTKSCRLHHENFTCFDGKQMASPDAGTNGNEKHLKAAIIGLSIGLATVITLALLAILFLYKPINKSSAVQNQPRNTYSGPYRSTTNPASGAVYFGIPVFSYEELQEATNNFDPARELGEGGFGTVYHGKLRDGREVAVKRLFERNYRPVESFNNEIQILTRMRHTNLVSLYGCTSRHSRELLLVYEYIPNGTLSCHLHGDRGKHGLLPWPVRMKIAIETAGALAYLHASDIIHRDVKSSNILLDNNFCVKVADFGLSRLFPIDATHVSTAPRGTPGYVDPDYRICYQLTSKSDVYSFGVVLVELISSLPAVDMARDRDEIKLANLAIRRIQRGAFYGKKYNQRNCPTSFHCGKFGDIQFPSTNKNNLDCGLPIRGCDDQNAATEVQLSNQTWYEFESINGNNSISVIDHKLQRLLASRCCNAFTYNINATLTPSTPVLHFQIEMEHSITLLRCRHASYRPSNKYIKYTSCNGYDIYYPTQSPEIDDMYTGSENACSTIQLPIKSSPMDYSTGTALYNLLTAGFRIILLLSEDCGKCYENGGQCQVDKESLYCAGSKEQADPPQPRKADPPVQAVSHDQQKCPNLNPIPESGDAFLGIPVFSYTELEKATNKFDEARELGSGGYGNVYYGTLHDGREVAVKRLYEHNYRQVEQFMNEIEILTRLHHRNHVSLYGCSSRHSRQLLLVYEYIPNGTVVCHLHGDLAKDGFLSWPIRMKIAISANFGLSRLFPNNVTHVSTAPQGTLGYVDPEYHQCYQLTSKSDVYSFRVVLIELISSLQAVDITRETDEINLSNLAIKKIQKRAFCELVDPSLGFELDQQFKRKIVSVAELAFQCLKEYKHLRPSMVEVLEELKRIDAGEDMPKNIKEADVNLPV. 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01108 1085 FunFam receptor-like protein kinase FERONIA 289 399 - -
Seca9g01108 1085 ProSitePatterns Protein kinases ATP-binding region signature. 830 852 IPR017441 GO:0005524
Seca9g01108 1085 SUPERFAMILY Protein kinase-like (PK-like) 303 524 IPR011009 -
Seca9g01108 1085 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 20 547 IPR044652 GO:0004672
Seca9g01108 1085 Gene3D Transferase(Phosphotransferase) domain 1 896 1077 - -
Seca9g01108 1085 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Seca9g01108 1085 Gene3D Transferase(Phosphotransferase) domain 1 400 564 - -
Seca9g01108 1085 SMART serkin_6 323 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01108 1085 SUPERFAMILY Protein kinase-like (PK-like) 809 1069 IPR011009 -
Seca9g01108 1085 Pfam Protein tyrosine and serine/threonine kinase 827 913 IPR001245 GO:0004672|GO:0006468
Seca9g01108 1085 Gene3D Phosphorylase Kinase; domain 1 299 399 - -
Seca9g01108 1085 Gene3D Phosphorylase Kinase; domain 1 802 895 - -
Seca9g01108 1085 ProSiteProfiles Protein kinase domain profile. 824 1066 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01108 1085 Pfam Protein kinase domain 326 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01108 1085 ProSiteProfiles Protein kinase domain profile. 323 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01108 1085 MobiDBLite consensus disorder prediction 766 794 - -
Seca9g01108 1085 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01108 Seca-Chr9 20467828 20476224 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01108 49 546 Receptor kinase-like Gene Family AT1G25390 44.834 3.08e-116 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Seca9g01108 PK_Tyr_Ser-Thr 7.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01108 - - var:108334729 514.998