Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01097 ATGGAGGTGCAAACTCCACCACAACCCACTCCTCCGCCGCCCCATCTCAACTTCCCTGACTCCGCCAACTCCTCCCCTCGCTCGCGGAACACCGATTCATGGGACGAGCCACACCCTCCCTCAACCACCACCACCAAGCTCCGCCTCATGTGCAGCTACGGCGGCCAAATTGTCCCTCGCCCCCACGACAAGTCCCTCTGTTACGTCGGCGGCGACACCCGCATCGTGGTGGTGGACCGCCAAACCTTACTCTCTGACCTCTCCACGCGCCTCTCCAAGTCCTTCCTTAACGGCCTTCCCTTCCTTCTCAAGTATCAGCTCCCAAACGAAGACCTAGATTCCCTTGTTTCCGTTACCACCGACGAAGACCTCGAAAACATGATCGACGAGTACGATCACCGAACCTCCTCCAAACCTTCCAGAATTCGCCTCTTCCTCTTCCCGACCCAGCCCGCAACGGCCAAGACAGAGGACTGGTTCCTCAACGCGCTGAACGGCGCCGGGGGCCTGTCGGACTCCGGCTCGATGAATGGCCTCCTTGGACTCGACGACGAGGAGGCTGTTGCCGCCGGCGTCGTGAACAACAACGGGCAGGAGGTTCAATCCGTGCCGGATTCGCCGATGCTGGAGACGAATTCGTCTTTCGGGTCTACTTCATCGTCGCCGTCGGTGGCGAATTTGCCGCCGATAAAGGTTCGTGTGGAGGATGGCGGTAACGGTGGTGGTGAAATTAGGGCGCAGGATCAGAAGGTGGTGGGAATTGAGGAACAGTTTGCTCAATTGGGTGTTGGTGGTGTGGTGCAGAAGCAGGATGAGGGTTTTGGTGCGCTGTCTTCGAGCTCTGCCGCGACGGTTGTTGTCTCCGATGATGAGAGATCAGAGAATGGGGTCCCTGTGGGGTATAGCAAACCACCAACCTCTCAGCCTCAAACACAATCACAAACACAAGCTCAGACTCAGTTTCCCCAATTTCAACAGAAGTCAACCGGTGTCTTTGATTTGCCTTCCCCTGATTCAGTTTCAAGTGATAGTAGTCTTTCAAATCCAATGTCACGCCCAAAACCTGTTATCTATCAAGACCAAGTTCAAATTCAATCTGGAACTTCATGGGTTCCTACTAGCTCTGTTGATCCCAAGCTTAATGTGTCTGATCAACATGGTCAGTTCCAGATGCATCAGCAACATGTTCATGACCGTGGATATGTGTTGCAACAACAGCAATTTGATCAGCAACAGCAGGCTCAACCCCAACAACAGTTTATACACGGCACACATTTAATTCACCAGCATACCCCTGCTTACTATACTGTATATCAGCATCAGCAGCAACAGCTCCATCCCCAGCATCACCATCTGCTTGATCAACAATACCCAGTTTATTATGTGCCTGCTACACAGGCCCAAGCATACAACTTGTCCACACAGCAGGCTAATGTAGGTGAATCTGTGACAACAACTGTTCCTTCTAACCTGCCCCAAAATCTGCCAAATCCTGCTGCAATGGTTCCATCATCTGCTGCTTACAACCCCGGGAGAAATGCTCCCTTGCCTAATTCTGAAGTAGCAGCAGGTGCATATAGATTAGTTCAAGTTCCTACTAATCAGCATCAGCAACGATATGTTGCTTACTCCCAGATTCACCATCCTTCTCAATCCATGGCCCCTAATTCTGCAGCACCTGCTAATTATGCTTATGACTATGCCAATTCTGCTCATGCTCAAATGTTTTATACTCAACCTTTGGCACCCCAACAAATCCCTTCGCAGTACCAGACCATGACAGCTGCTGAAGTTTCTGCTCAGCTTCCCTCGGAGGGCATGAAGCAGCACAGGTAA 1836 0.5185 MEVQTPPQPTPPPPHLNFPDSANSSPRSRNTDSWDEPHPPSTTTTKLRLMCSYGGQIVPRPHDKSLCYVGGDTRIVVVDRQTLLSDLSTRLSKSFLNGLPFLLKYQLPNEDLDSLVSVTTDEDLENMIDEYDHRTSSKPSRIRLFLFPTQPATAKTEDWFLNALNGAGGLSDSGSMNGLLGLDDEEAVAAGVVNNNGQEVQSVPDSPMLETNSSFGSTSSSPSVANLPPIKVRVEDGGNGGGEIRAQDQKVVGIEEQFAQLGVGGVVQKQDEGFGALSSSSAATVVVSDDERSENGVPVGYSKPPTSQPQTQSQTQAQTQFPQFQQKSTGVFDLPSPDSVSSDSSLSNPMSRPKPVIYQDQVQIQSGTSWVPTSSVDPKLNVSDQHGQFQMHQQHVHDRGYVLQQQQFDQQQQAQPQQQFIHGTHLIHQHTPAYYTVYQHQQQQLHPQHHHLLDQQYPVYYVPATQAQAYNLSTQQANVGESVTTTVPSNLPQNLPNPAAMVPSSAAYNPGRNAPLPNSEVAAGAYRLVQVPTNQHQQRYVAYSQIHHPSQSMAPNSAAPANYAYDYANSAHAQMFYTQPLAPQQIPSQYQTMTAAEVSAQLPSEGMKQHR. 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01097 611 SMART PB1_new 61 149 IPR000270 GO:0005515
Seca9g01097 611 CDD PB1_UP2 50 147 - -
Seca9g01097 611 PANTHER OS05G0427100 PROTEIN-RELATED 19 466 - -
Seca9g01097 611 MobiDBLite consensus disorder prediction 198 227 - -
Seca9g01097 611 MobiDBLite consensus disorder prediction 1 46 - -
Seca9g01097 611 Gene3D - 66 148 - -
Seca9g01097 611 MobiDBLite consensus disorder prediction 1 19 - -
Seca9g01097 611 MobiDBLite consensus disorder prediction 300 353 - -
Seca9g01097 611 SUPERFAMILY CAD & PB1 domains 62 154 - -
Seca9g01097 611 MobiDBLite consensus disorder prediction 198 226 - -
Seca9g01097 611 MobiDBLite consensus disorder prediction 20 46 - -
Seca9g01097 611 Pfam PB1 domain 62 148 IPR000270 GO:0005515
Seca9g01097 611 ProSiteProfiles PB1 domain profile. 46 149 IPR000270 GO:0005515
Seca9g01097 611 MobiDBLite consensus disorder prediction 278 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01097 Seca-Chr9 20371102 20373767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01097 46 196 MAP Kinase Kinase Kinase AT3G46920 37.580 2.65e-24 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01097 - - psat:127098305 607.06