Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01086 ATGAAAGTCGTTGGAAAAGAAAAGGTCATCAAAGTCGGCATGGTGGAACAGATCAAGAGAGAAATCTCTACCATGAACATGGTGAAGCATCCAAACATCGTTCAACTCCATAAAGTCATGGCTAGCAAGACCAAGATCTACATCACCATGGAACTCATTCGCGGTGGTGAGCTCTTCAACAAGATAACAAAGGGATGTTTGAGGGAAGACTCAGCCAGAATGTACTTCCAGCAACTCATCTCCGTCGTCGATTTCTGCCACTGA 264 0.447 MKVVGKEKVIKVGMVEQIKREISTMNMVKHPNIVQLHKVMASKTKIYITMELIRGGELFNKITKGCLREDSARMYFQQLISVVDFCH. 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01086 87 Gene3D Transferase(Phosphotransferase) domain 1 1 87 - -
Seca9g01086 87 Pfam Protein kinase domain 1 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01086 87 SUPERFAMILY Protein kinase-like (PK-like) 1 87 IPR011009 -
Seca9g01086 87 ProSiteProfiles Protein kinase domain profile. 1 87 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g01086 87 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01086 Seca-Chr9 20248064 20248327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01086 1 87 CBL-interacting serine-threonine protein kinases AT5G01810 65.517 4.25e-39 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Seca9g01086 Pkinase 2.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01086 - K07198 gmx:100806762 148.673