Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01068 ATGGATTTGACAGCGGAGAAGAAGGAATCAGAGAGCAACAACAACCCTGAGATTTCCAATCAAATCGCAGATTCTGCTTCTCAATTAGCTTCTGACGCCAACAATAACAACTATAACAAAGAAGCCGAAGAGCGACAAGCACGTGAACTCAAAGCTGGCCTTCACCCCTTAAAGAACAAATTTGTGTTTTGGTACACGCGTCGAACACCTGGAGTTCGAAATCAAACTTCATACGAGGACAACATAAAGAAAATTGTTGATTTCAGTACGGTCGAAGGATTTTGGGTCTGCTATTGCCATCTTGCTCGTCCTTCTTCTTTGCCTAGTCCAACAGATTTGCATCTTTTTAAAGAAGGAATTCGTCCATTATGGGAGGACTCTGCTAACTGCAATGGCGGTAAATGGATTATACGATTCAAAAATGTTGTCTCAGGTCGTTTCTGGGAAGACCTGGTTCTCGCCTTAGTGGGTGACCAATTGGATTATGGGGATAACATATGTGGTGCAGTACTAAGCATACGATTCAATGAGGATATATTGAGTGTTTGGAATCGCAATGCATCTGATCATCAGGCTGTAATGGCTCTGAGAGATTCAATCAAACGTCACTTAAAGCTTCCTCACAGCTATGTTATGGAGTACAAGCCCCATGATGCTTCTCTGCGAGATAATTCATCTTACAGGAACACTTGGTTGAGAGGCTAG 705 0.4255 MDLTAEKKESESNNNPEISNQIADSASQLASDANNNNYNKEAEERQARELKAGLHPLKNKFVFWYTRRTPGVRNQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKNVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG. 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01068 234 Gene3D RNA Cap, Translation Initiation Factor Eif4e 19 228 IPR023398 -
Seca9g01068 234 MobiDBLite consensus disorder prediction 14 37 - -
Seca9g01068 234 MobiDBLite consensus disorder prediction 1 45 - -
Seca9g01068 234 Pfam Eukaryotic initiation factor 4E 56 214 IPR001040 GO:0003723|GO:0003743|GO:0006413
Seca9g01068 234 SUPERFAMILY eIF4e-like 35 230 IPR023398 -
Seca9g01068 234 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 31 223 IPR001040 GO:0003723|GO:0003743|GO:0006413
Seca9g01068 234 FunFam Eukaryotic translation initiation factor NCBP 26 227 - -
Seca9g01068 234 ProSitePatterns Eukaryotic initiation factor 4E signature. 112 135 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01068 Seca-Chr9 20078461 20081184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01068 42 234 Eukaryotic Initiation Factors Gene Family AT5G18110 85.492 5.46e-126 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01068 K03259 - gmx:100499744 414.461