Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01062 ATGGCAGTAAGCATTACATCTTCTCACACTGTCATTCCCTCCCACACTACTCCAAATGATACTGTGTTACTGTCTGAGAGTGAACAAATTAATGCTCACAATCATGCACTCACCATCTACATCTATAGGCCAAATCACAACCGCAATTTCAAAAACATTGTGGACACAATAAGACACTCTCTTAGCAAGATCTTAGTCCACTACTACCCTCTAGCTGGCAGGTTACACATCACAAGGGGTGGAAGATGGGAATTGGAGTGCAATGCAAAGGGTGTAAATCTATTGGAAGCTCAATCCACAAAAGCACTTGATGAGTATGGTGACTTTGAACCTAATGACACCATCACAGAGCTTATTCCTAAGGTTGATTATAGTGAACCTTTGGAGAATTTGCCACTGTTATTTGTGCAGTTAACAAAATTCACCTGTGGTGGCTTCTGTGTTGGCATTGCCATTTCCAATGTCTTAGTTGATGGAATTTCTGGCACTCTCTTTATTGATGCATGGGCTAAGGTTGCTCGAGGTGGTACTTTGGAGGATTGTGAGATGCCACTTCTGAACAGAACAGTTCTGAGATCAGAGACAAACTTCAACATGGCATCATCACCATGCTTTGACCATCCAGAGTTCAAGCCCTTGCCACTTGTCGTAGGCAACACTGATGCCATGGTGGAGCTTGAGAAAGAGACAACTCTTGCAATACTCAAACTCACAAAGGATATGGTGGAGAAGCTGAGGAAGAAAGCCAATGAGTTTATGGAAGATGACAATCAGAGTCTGGGGAAGAGGGGAAGAAGAGCTTATAGCAGATATGAGAGCATTGGTGCTCATATATGGAGGTGTGCATGCAAGGCTCGCTTTGGTGATCACAATCAACCAACGGTGGTTTACATTGTTGCAGGTACCAGAAACAGATTGAAGCCACCTCTCCCTTCAAACTACTTTGGAAATGCCACACATCCAACTCTGACACCAACATCCTTCAGTGGGGACATTGTGTCAAAGCCTTTGAGCTATGGGGCACAAAAGATTAGGGAAGCAATTGAAGTGTTAACAGATGAGTATTTGAGGTCAGCGTTTGATTTTATTGGGAGTCAGAAAAATGTTGGGTGGCTAAGGCCATCCTTGAATAATGAAGGGATTGTGGAAGCCCCTTTTCTTGGGAATCCTAATCTTAACATATGGAGTTGGATGAGTAATATGCCAATGTATGGACCAGATTTTGGATGGGGAAAACCTGTATATATGGGTCCTGGTGCTGTGAAAGGAGATGGCAAGGCATTCATTATGCCAGGTCCATTAGATGATGGGTCTCTTTCCATAGCCATTCGTTTGCAAACTTCTCACATGGAAGTTTTCAAGGAGTACTTCTACAAGGACATATGA 1386 0.4315 MAVSITSSHTVIPSHTTPNDTVLLSESEQINAHNHALTIYIYRPNHNRNFKNIVDTIRHSLSKILVHYYPLAGRLHITRGGRWELECNAKGVNLLEAQSTKALDEYGDFEPNDTITELIPKVDYSEPLENLPLLFVQLTKFTCGGFCVGIAISNVLVDGISGTLFIDAWAKVARGGTLEDCEMPLLNRTVLRSETNFNMASSPCFDHPEFKPLPLVVGNTDAMVELEKETTLAILKLTKDMVEKLRKKANEFMEDDNQSLGKRGRRAYSRYESIGAHIWRCACKARFGDHNQPTVVYIVAGTRNRLKPPLPSNYFGNATHPTLTPTSFSGDIVSKPLSYGAQKIREAIEVLTDEYLRSAFDFIGSQKNVGWLRPSLNNEGIVEAPFLGNPNLNIWSWMSNMPMYGPDFGWGKPVYMGPGAVKGDGKAFIMPGPLDDGSLSIAIRLQTSHMEVFKEYFYKDI. 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01062 461 Gene3D - 218 459 IPR023213 -
Seca9g01062 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 457 - -
Seca9g01062 461 Gene3D - 1 212 IPR023213 -
Seca9g01062 461 Coils Coil 235 255 - -
Seca9g01062 461 Pfam Transferase family 1 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01062 Seca-Chr9 20030543 20033039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01062 1 459 Monolignol Biosynthesis Gene Families AT5G48930 36.819 1.14e-101 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01062 K13065 - gmx:100779652 639.802