Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01045 ATGGCAAATAGGCTCCATGCTTCAGTGCTTTTGGTTTTGGTTACAGTTTTACTTTCAATCTATTACTCAGAGCAACTGCAACACTCCCACACTAAGACCCTTCTAAGAATTCAACACCTATTGAACTTTCCTTCTGTTTTAAGCAGCTGGAATATCAACACAGACTTTTGCAACTCAGATTCAAAAGCTTCTCTTACTGTTGTATGCTATGAGGACACCATAACCCAGCTGCAAATAGTTGGTGAAACAAGAGCTCAACTTCTTCCAAGAAATTTCTCAATAGATTCCTTTGTCACAACACTGGTGAGGCTTCCTAGTTTGAAAGTCCTCACCCTGGTTTCTCTAGGCATATGGGGTCCATTGCCTGGTAAGATTGCTGGTTTGTCATCACTGGAAATAGTTAATTTAAGTTCAAATTTTCTATATGGGGCCATTCCTCAGGAATTTGCATTGCTATCACATCTCCAAGCACTCATTCTTGATAACAACATGTTTGCTGGACATGTTCCTGATTGGCTGGATTCTTTTCCACCCTTAACTGTGTTAAGTTTGAAGAACAATTTGTTCAATGGTTCTCTTCCTGATTCACTGAGTAGCTTGGAGAATATGAGAGTTCTTTCACTTTCTCATAACCATTTTTATGGACCAGTACCTGATTTGAGCCGTTTGACAAATCTTCAAGTGCTGGAATTGGATGATAATGGTTTTGGACCTCAGTTTCCAAGGCTTGGAAACAAGTTGGTTACTCTAGTACTAAGAAACAACAAGTTCAGGTCTAATGTCCCTGATGAAGTGAGCTCATATTATCAGCTTGAGAAACTTGACATCTCATCAAATACATTTGTTGGGCCACTCCAGTTAGCACTGTTATCACTTCCTTCTATGACTTATCTGAACATTTCTGGAAACAAATTAACAGGAATGCTTTTTGAGAATCTGTCTTGCAGTTCTGAACTTGAAGCAGTGGATTTATCCTCAAATCTTTTGACTGGGAGCTTACCAAAATGTTTAATGTCAGATTCCAATGGTAGGACTGTTTTGTATGATAGAAACTGTCTAGAGGAGACAAATCAAAACCAGCATGAACAGACCTTCTGCCACACTGAAGCCATAGCTGTGGGAATAGTACCTGAGAGAAAGAAGCATAAAAGAGTATCTAAGACAGTCCTTTCCCTTGGTATAGTTGGTGGAACTTTTGGAGGAGTAGCACTTGTTGCACTGCTTTTCTTCATTATTAGAAGAGCAACTGCCAAAAGCAAAGTGAAGAATCCTACAACAAAATTGATATCAGAAAATGCAGCTTCTGGATACACATCTAAGTTACTCTCTGATGCAAGGTTCTATATACCTCAAACAATGAAGTTTGGAACATTTGGCTTGCCACCTTATCGAGCTTTCTCATTGGAAGAGATTGTGGCAGCTACAAACAACTTTGACATGGCTTCTTTTATGGGTGAAGGTTCTCAAGGAAAGATGAATAGAGGTCAACTGAAGGATGGTTCACTTGTTGCCATTAGATGTGTGAAAATGACCAAAAGCTACAGCACTCAAGACTTCATGCATCACATAGAGCTGATATCCAAATACAGGCATCGTCATATAGCCAGCGTTCTTGGACACTGCTTTGAATGTTACTTAGATGATTCAAGTGTCAGCACAATATTTATTGTCTTTGAGTATGTACCAAATGGAACACTCAAGAGCTGGATTTCAGATGGGCATTATAGAAAGTCCCTGACTTGGACCCAACGCATAGCAGCTGCAACTGGAGTAGCAAAGGGCATCGAATTTTTGCATACAGGGATTGTCCCTGGTGTATATTCAAACAATCTCAAAATAACAGATGTTTTACTGGACCAGAATTTTGTTGCAAAAATCAGCAGTTATAACCTGCCTTTATTATCTAACATGGGAAAGGTTGGGCAGGGAAATCCTTCCAGTGGATTCAAAAGTTCTAGTATTAAGAAAAGTGTAAAAAATGAAGATAAGTCTGATATATATGACTTTGGAGTAATACTGCTGGAACTCATTCTTGGAAGGACAATAAAGCAGAGGAATGTGGAGACCTTAAAGGATCTGTTGCAAGCAAGCATAACAGCTGATGATGAAGCTAGGAGGAGCATTATAGATCCAGCAGTTCGCAAGGTATGCTTGGATCAATCATTGAAGACAATGATGGAGATTTGTGTGAGGTGCCTAGCTAAAGAGCCAGAAGATAGACCCTCAATAGAAGATGTTTTGTGGAATCTTCAGTTTGCTGCTCAAGTCCAGGAGGCATGGAGAGGGGACTCTTCTCAAAGTAGTGATGGGTCTCCCATCTCACCTTTAGCATCAAGACCAATGACCTTCCGTTAG 2355 0.3992 MANRLHASVLLVLVTVLLSIYYSEQLQHSHTKTLLRIQHLLNFPSVLSSWNINTDFCNSDSKASLTVVCYEDTITQLQIVGETRAQLLPRNFSIDSFVTTLVRLPSLKVLTLVSLGIWGPLPGKIAGLSSLEIVNLSSNFLYGAIPQEFALLSHLQALILDNNMFAGHVPDWLDSFPPLTVLSLKNNLFNGSLPDSLSSLENMRVLSLSHNHFYGPVPDLSRLTNLQVLELDDNGFGPQFPRLGNKLVTLVLRNNKFRSNVPDEVSSYYQLEKLDISSNTFVGPLQLALLSLPSMTYLNISGNKLTGMLFENLSCSSELEAVDLSSNLLTGSLPKCLMSDSNGRTVLYDRNCLEETNQNQHEQTFCHTEAIAVGIVPERKKHKRVSKTVLSLGIVGGTFGGVALVALLFFIIRRATAKSKVKNPTTKLISENAASGYTSKLLSDARFYIPQTMKFGTFGLPPYRAFSLEEIVAATNNFDMASFMGEGSQGKMNRGQLKDGSLVAIRCVKMTKSYSTQDFMHHIELISKYRHRHIASVLGHCFECYLDDSSVSTIFIVFEYVPNGTLKSWISDGHYRKSLTWTQRIAAATGVAKGIEFLHTGIVPGVYSNNLKITDVLLDQNFVAKISSYNLPLLSNMGKVGQGNPSSGFKSSSIKKSVKNEDKSDIYDFGVILLELILGRTIKQRNVETLKDLLQASITADDEARRSIIDPAVRKVCLDQSLKTMMEICVRCLAKEPEDRPSIEDVLWNLQFAAQVQEAWRGDSSQSSDGSPISPLASRPMTFR. 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01045 784 SUPERFAMILY L domain-like 101 353 - -
Seca9g01045 784 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 451 560 - -
Seca9g01045 784 Gene3D Ribonuclease Inhibitor 243 370 IPR032675 -
Seca9g01045 784 MobiDBLite consensus disorder prediction 761 775 - -
Seca9g01045 784 Gene3D Ribonuclease Inhibitor 27 242 IPR032675 -
Seca9g01045 784 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 245 - -
Seca9g01045 784 MobiDBLite consensus disorder prediction 761 784 - -
Seca9g01045 784 PANTHER UNNAMED PRODUCT 95 680 - -
Seca9g01045 784 Gene3D Phosphorylase Kinase; domain 1 449 560 - -
Seca9g01045 784 Gene3D Transferase(Phosphotransferase) domain 1 561 769 - -
Seca9g01045 784 Pfam Protein tyrosine and serine/threonine kinase 482 747 IPR001245 GO:0004672|GO:0006468
Seca9g01045 784 SUPERFAMILY Protein kinase-like (PK-like) 459 752 IPR011009 -
Seca9g01045 784 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 561 766 - -
Seca9g01045 784 ProSiteProfiles Protein kinase domain profile. 478 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01045 Seca-Chr9 19720536 19725330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01045 43 778 Miscellaneous Gene Families AT3G03770 64.103 0.0 908
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Seca9g01045 PK_Tyr_Ser-Thr 2.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01045 - - gmx:100813207 1291.56