Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01030 ATGGCAGTTTTCACCTCCAACTCCAAACCTCAACTTAGGAAACTCATCACTCTTCTTCTTAACATATCTTTCCTTTCCCTCCTTTTTCTCTTCTTCAAATCCCATCTCCACCCTTCAAGTTCTAATTTTCATGCCTCCACAACCATCTTCAACCATGCTCGAATGCTCAATGACATTAGAGTTGATGCCTGCACTGACCTTCACAAGTACTCAGATTATAGCCAAAAGTGCTTGTATGTCAAAACTCATTCTGACTGCAGATCAAAAGGGTACATAAACTATCTTCAAATCTTTTACTGCAGTCTTGGCCATTCCCCAATTCTTGGTCATTTCCTACTTATTCTGTGGCTTGTGGTGTTGTTCTATCTTTTGGGTGACACAGCTTCAAATTACTTTTGCACATCCTTAGAAGGTTTATCTGACATCTTGAAACTATCTCCCACCATAGCTGGAGTAACCTTACTTTCTCTTGGAAATGGTGCTCCTGATTTTTTTGCTAGTGTTGTTTCTTTCACAAGTTCCAACAATGGTGCAGTTGGTCTTAATAGCATCCTGGGAGGGGCTTTTTTTGTGTCTACTGCTGTCTTGGGGATCATAAGCTTTGTGGTTGTCCCAAATGAAATTGCAGTTGATAAGGCCAGTTTCATTAGAGATGTCATTTTCTTCCTTTTCTCTCTGTTCATCCTCCTTGTCATCATTGCTATTGGTAAAATTAGCTTGTTGGGTTCAATCTGCTATGTTTCTATCTACTTCCTTTATGTGTGTGCTGTCTCTGCTACACATTTCATCTATGGAGGGGACAGGAAAGAAGGGGAATCTTCAACATCTTCTGATGACTTAGTAGAGTCTGGGATACCATTGTTGGGCTGTGTTGATGATGAGAAACCAAATTTAGCCAATAAAGTGAGTGTTGAAGATAAGGAGGAAAAGCCAGAGGGTTTTGATAATTTTTCATTTGATTGTACTTACTTTGGCAAGTTTCTACAGATACTAGAATTGCCCCTTTGCTTGCCAAGAAGACTCACTATACCAGTTGTGAGTGAGGAGAAGTGGTCAAAGCCATATGCTGTTATATCTGTCACATTAGCACCAGTTTTGTTTGCAGCTCTTTGTAATACCCAGATGGAAAATGAGAGTTCAAAGAGTGGCCTAGTTGCATACTTAACAGCTGCTTTAATTGGCATTGTTTTGGGGAATATGGCATGTGTGACCACCAAGAGCAATAGTCCACCAAGAAAGTGCTTGTTTCCTTGGCTAGCAGGGGGATTTTCTATGAGTGTAACATGGACTTATATCATTGCTGAGGAACTGGTTTCCCTCTTGGTCTCTCTTGGAAATATCATAGGGGTTAGTCCTTCAATCCTTGGATTAACTGTCCTAGCTTGGGGTAATTCTCTAGGGGATTTGATAGCCAATGGTGCAATGGCTAAGAATGGTGGAGCAGATGGGGCCCAAATAGCAGTCTCTGGTTGTTATGCAGGTCCTATGTTTAATATTTTGATGGGTTTGGGCTTGCCTCTTGTTCTCTCAGCATGGTCTGAATATCCAAACTCTTATGTCATTCCCAAGGACACTTCCCTGTTTGGAACACTTTTGTTTTTGATGGGAGGGGTGCTTTGGGCCCTCGTGATTTTGGCAAAGAAGGACATGAGACTTGATAAGTCCTTGGGGGCTGGGCTCTTGACCATATACCTCTGCTTTTTGTTTTTAAGGATAGCTATGGCAATCGGTGCTCTTAAATTTTAG 1746 0.4135 MAVFTSNSKPQLRKLITLLLNISFLSLLFLFFKSHLHPSSSNFHASTTIFNHARMLNDIRVDACTDLHKYSDYSQKCLYVKTHSDCRSKGYINYLQIFYCSLGHSPILGHFLLILWLVVLFYLLGDTASNYFCTSLEGLSDILKLSPTIAGVTLLSLGNGAPDFFASVVSFTSSNNGAVGLNSILGGAFFVSTAVLGIISFVVVPNEIAVDKASFIRDVIFFLFSLFILLVIIAIGKISLLGSICYVSIYFLYVCAVSATHFIYGGDRKEGESSTSSDDLVESGIPLLGCVDDEKPNLANKVSVEDKEEKPEGFDNFSFDCTYFGKFLQILELPLCLPRRLTIPVVSEEKWSKPYAVISVTLAPVLFAALCNTQMENESSKSGLVAYLTAALIGIVLGNMACVTTKSNSPPRKCLFPWLAGGFSMSVTWTYIIAEELVSLLVSLGNIIGVSPSILGLTVLAWGNSLGDLIANGAMAKNGGADGAQIAVSGCYAGPMFNILMGLGLPLVLSAWSEYPNSYVIPKDTSLFGTLLFLMGGVLWALVILAKKDMRLDKSLGAGLLTIYLCFLFLRIAMAIGALKF. 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01030 581 Pfam Sodium/calcium exchanger protein 115 256 IPR004837 GO:0016020|GO:0055085
Seca9g01030 581 Pfam Sodium/calcium exchanger protein 419 572 IPR004837 GO:0016020|GO:0055085
Seca9g01030 581 Gene3D - 145 275 IPR044880 -
Seca9g01030 581 Gene3D - 356 573 IPR044880 -
Seca9g01030 581 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 19 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01030 Seca-Chr9 19467499 19469244 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01030 62 579 Antiporters AT5G17860 54.023 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01030 K13754 - gmx:100818583 898.271