Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01026 ATGGCTATCACAGTTTCTGTGTCCAACAAACACATGGGTTACACCTTGTTCTTGAACATCTCCTGCCTCCTGGTGATTTCTGCTTTCATGATTATTCATTTCCACACTCCAGAAATTGTTGTGGTTGTGAAGAGGAACGACTCTGCCTTTGCTGATGATGGCAGTGGTGAACAGGACTGCAAGAGGTTGGACAACCTTGGTGACTACAAAGCCAAGTGCATGTACCTGAAATCCCATGACCCATGTGTCTCTCAGGGCTACATTGATTACCTTTACCTTTTTCATTGTAAATTTGGGAGATTCCCTCTAATGGGTTACAGTCTCTTGTTTCTTTGGCTCCTAGTTCTGTTTTATTTGTTGGCTAATACAACTTCTGAATATTTTTGTCCTTCTCTTGAAAAATTGTCCAAATTGCTGAGATTGTCCCCTACAATTGCTGGAGTCACTCTCCTCTCTCTTGGCAATGGTGCCTGTGATGTTTTCTCCAGCCTTGTATCTTTCCAGGGAAGTGGGACCCGTAGCATTGGCTTGAACACGGTTCTTGGGGGTGTTTCTTTTGTGTCCTGTGTTGTGGTAGGGATAGTGAGCATTTCAATACGGCACAAGGGGGTTCAGGTTATGAAATCAGCTTTTGTAAGAGATGTTTGTTTTCTCCTTTTGGTTCTTATGTGCTTGTTTTGTATTTTGATTACTGGTGAGATCAATGTTTTTGGAGCAATTGGTTTTTCTTTGATATATGTGGTGTATGTGATTGTTGTTTATGTCTCTTCTACTAGATGGAAGGATGGGGGTGGTGATGATGCTGAAAGGGGTGATATTTCAAGTTATGGCAATGACTTGAGTTTGAGTGTGCCTCTTCTCAGTAGTATGAGGAAAGGACCAATTGATTGTGTTGAAAGTTGTCCTCAAGAATGTGACATGAAAATAAAAAAGAATTGTTGCTGCATGAGATCTTCAGTATGTAGAATGTCACTTTATGTTCTAGAGATGCCCCTTTACTTGCCTAGGAGATTGACAATTCCTGTTGTCTGTGAAGAGAGATGGTCAAAGCTGTATGCAGTTTTTTCAGTGATATTAGCACCAATTCTCTTGTCTGTCCTGTGGGACCCTCATGAAGGCTTCAGCACAGACCTTATTGTTTATGGAATTGGATTCTTGGTTGGAATGATTCTTGGTGTAGCTGCACTTTTCACTACTGAAATGTCAATGCCACCAAAGAAGTGCTTATTTCCTTGGCTTGCAGGAGGCTTTGTAATGAGTGTGACCTGGAGCTACATTATAGCTCAAGAGTTGGTGGGGTTGCTGGTTTCAATTGGCTACATATGTGGAATAAGTCCTTCAATTCTTGGCTTAACAGTTCTTGCTTGGGGGAACTCACTTGGGGATTTGATGACAAATTTAACCATGGCTTTAAATGGTGGACCAGAGGGTGCTCAAATAGCAATATCAGGCTGCTATGCTGGTCCTATCTTCAATACTCTAGTTGGATTAGGCTTGTCTCTTGTAACTTGTACATGGTCAGAGTACCCACAACCTATTGTGATCCCCAGAGATCCATATCTTTGGGAGACATTGGTATTTCTGGTGATTGGATTAGTTTGGGCACTTGTGGTTTTGATAAAAAGAAATATGAAGCTTGATGGACTCTTAGGAGGAGGGCTTTTAGTTGTTTACTTCATTTCTCTGTTTCTGAGGTTGATTCAGACACAAGGGTATCTCCAATTTAATGATTTGAAAGGCTTAGATTCTTAG 1752 0.4121 MAITVSVSNKHMGYTLFLNISCLLVISAFMIIHFHTPEIVVVVKRNDSAFADDGSGEQDCKRLDNLGDYKAKCMYLKSHDPCVSQGYIDYLYLFHCKFGRFPLMGYSLLFLWLLVLFYLLANTTSEYFCPSLEKLSKLLRLSPTIAGVTLLSLGNGACDVFSSLVSFQGSGTRSIGLNTVLGGVSFVSCVVVGIVSISIRHKGVQVMKSAFVRDVCFLLLVLMCLFCILITGEINVFGAIGFSLIYVVYVIVVYVSSTRWKDGGGDDAERGDISSYGNDLSLSVPLLSSMRKGPIDCVESCPQECDMKIKKNCCCMRSSVCRMSLYVLEMPLYLPRRLTIPVVCEERWSKLYAVFSVILAPILLSVLWDPHEGFSTDLIVYGIGFLVGMILGVAALFTTEMSMPPKKCLFPWLAGGFVMSVTWSYIIAQELVGLLVSIGYICGISPSILGLTVLAWGNSLGDLMTNLTMALNGGPEGAQIAISGCYAGPIFNTLVGLGLSLVTCTWSEYPQPIVIPRDPYLWETLVFLVIGLVWALVVLIKRNMKLDGLLGGGLLVVYFISLFLRLIQTQGYLQFNDLKGLDS. 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01026 583 Gene3D - 141 268 IPR044880 -
Seca9g01026 583 Gene3D - 349 566 IPR044880 -
Seca9g01026 583 Pfam Sodium/calcium exchanger protein 413 565 IPR004837 GO:0016020|GO:0055085
Seca9g01026 583 Pfam Sodium/calcium exchanger protein 110 254 IPR004837 GO:0016020|GO:0055085
Seca9g01026 583 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 318 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01026 Seca-Chr9 19432526 19434277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01026 6 571 Antiporters AT5G17850 53.147 6.23e-168 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01026 K13754 - gmx:100813848 814.298