Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g01017 ATGGAAGAAGATCAACAGCAACACACCCCAAATAGTCCAAACCAAAGCACTGAGAGGAGTGAACCCGTGAGGTCAAGATGGACTCCAAAACCAGAACAAATCCTCATACTTGAGTCCATCTTCAACAGTGGCATGGTTAACCCACCAAAAGATGAAACTGTCAGAATAAGAAAACTTCTTGAGAAATTTGGAACCGTTGGTGATGCCAACGTCTTCTACTGGTTCCAGAACCGCCGTTCACGCTCCCGCCGCCGTCAGCGCCAGATGCAGGCCGCAGCTCTTGGCGGTGCAAATGTAAACAACTCTGCTAATTCTTCTGCTTCTGCTGCTGCAGCTACTGCTGCTATGGGTTTTGGTGGTTCTTCTTACCTTTCTGCTCATGCATCTTTCATTTCTGGTGGTTTACCTTCATCATGTGGTGGTGCTGGAAGTGGCCAAGAAGGGTTGAGTGGTTTCTTCTCAGGTGGCTCAACTCATCAAATGGGGTTGGGGTTGTTCCCTCAAATTGATCACACCTCAGCTGCTACATCATCAGTTTTGTATCCTTCTGATGCACCAAATTTAAACTTTCAAACTGGTGGGTAG 585 0.4718 MEEDQQQHTPNSPNQSTERSEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQMQAAALGGANVNNSANSSASAAAATAAMGFGGSSYLSAHASFISGGLPSSCGGAGSGQEGLSGFFSGGSTHQMGLGLFPQIDHTSAATSSVLYPSDAPNLNFQTGG. 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g01017 194 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 192 IPR044558 GO:0003700|GO:0048830
Seca9g01017 194 Gene3D - 24 92 - -
Seca9g01017 194 SMART HOX_1 22 89 IPR001356 GO:0003677
Seca9g01017 194 MobiDBLite consensus disorder prediction 7 22 - -
Seca9g01017 194 Pfam Homeodomain 24 84 IPR001356 GO:0003677
Seca9g01017 194 MobiDBLite consensus disorder prediction 1 29 - -
Seca9g01017 194 ProSiteProfiles 'Homeobox' domain profile. 20 85 IPR001356 GO:0003677
Seca9g01017 194 FunFam WUSCHEL-related homeobox 11 24 91 - -
Seca9g01017 194 SUPERFAMILY Homeodomain-like 19 93 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g01017 Seca-Chr9 19249888 19251902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g01017 1 191 Wox Gene Family AT3G03660 49.519 1.09e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Seca9g01017 Homeodomain 5.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g01017 - - aprc:113866574 191.815