Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca9g01015 | ATGGATTCACTGCACTTCAACAGCAGTGGTTATGGTTTCTATGGGGACATGAATGCTTACCCTTCAGTTCATTTTCCTTCTTCTGCTACCCTTCCTGGTCCCCAACCTCTGTATAACACTTTTGAGGTGATGGGTCATGCTGGTGACACAGAGTCTGAAAGGTCTGATAGAGCCTTTCAGTTTTTGAACCCTTCAGTGTTCCATCCCCAAGAGAACATGGTAACAGAGAGAACCAACAATGAAGGGGATGATGGGTATTTTGGGGATAAAAACAAGAGCTTGTCTTTGCAACTTGGTGAGGAAAATGAAGCTAACAGTTCACCTGTCTCAGGGAAAATTGGACACACTAAGCTTTGTGTTAGAGGTCACTGGAGACCAGCTGAAGATGCAAAGCTTGAAGAGCTTGTTGCTCAATTTGGTCCTCAAAACTGGAACTCCATAGCAGAACATCTAGAAGGAAGATCAGGAAAAAGTTGCAGATTGAGGTGGTTTAATCAGCTAGATCCTAGAATTAACAGAACAGCTTTCACTGAGGAAGAAGAGGAGAAGCTTCTAGCTGCTCATAGAATGTATGGTAACAAATGGGCTATGATTTCTAGGCTCTTTCCTGGGAGGACTGATAATGCAGTTAAGAACCATTGGCATGTGATCATGGCTAGGAGGCAAAGGGAGCAATCATGTTTCTATAGAAGGAGAAAGCCAACATTTCAAAGCCAATCACCACCAAAAGGTTTAAATTTGACTCTGTCAAACAATGTAGCAAGTGAATCAACCATCTCAAGCACCATTGATGAATCTAACTCAACATGCACCAATCTCTCCCTCACTCCTTCTTCAGCCAGACCAATTCCTAGGCCTTTTCACAACCCAAATCATGTTCAAAATTACCAAGGCTATGGATCACCAATGGGTATGTCTGGAGGAAGCAGGGCACCAACTGGGGATGTGGGTTTTGACAAGTTTTTTAGTACCTGGAAGGGTTCATATGAGCATGGTCACATGGGAAAGCTAATGGGAGTGGACCAATCCAACTATTCAGATTCAAACTCAGAAGTTTCAGTATCTGAGTCAGTTACCACCAACAGGACTAATCTATCAAATTTTGGAGAAAGTGAAAATGTGGGGGATAAGATTAACATGTCATTTATTGACTTTCTTGGAGTAGGAGCTACATAG | 1176 | 0.4252 | MDSLHFNSSGYGFYGDMNAYPSVHFPSSATLPGPQPLYNTFEVMGHAGDTESERSDRAFQFLNPSVFHPQENMVTERTNNEGDDGYFGDKNKSLSLQLGEENEANSSPVSGKIGHTKLCVRGHWRPAEDAKLEELVAQFGPQNWNSIAEHLEGRSGKSCRLRWFNQLDPRINRTAFTEEEEEKLLAAHRMYGNKWAMISRLFPGRTDNAVKNHWHVIMARRQREQSCFYRRRKPTFQSQSPPKGLNLTLSNNVASESTISSTIDESNSTCTNLSLTPSSARPIPRPFHNPNHVQNYQGYGSPMGMSGGSRAPTGDVGFDKFFSTWKGSYEHGHMGKLMGVDQSNYSDSNSEVSVSESVTTNRTNLSNFGESENVGDKINMSFIDFLGVGAT. | 392 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca9g01015 | 391 | Pfam | Myb-like DNA-binding domain | 173 | 216 | IPR001005 | - | |
Seca9g01015 | 391 | Pfam | Myb-like DNA-binding domain | 121 | 167 | IPR001005 | - | |
Seca9g01015 | 391 | ProSiteProfiles | Myb-like domain profile. | 121 | 167 | IPR001005 | - | |
Seca9g01015 | 391 | FunFam | MYB transcription factor | 174 | 243 | - | - | |
Seca9g01015 | 391 | SUPERFAMILY | Homeodomain-like | 120 | 214 | IPR009057 | - | |
Seca9g01015 | 391 | Gene3D | - | 174 | 236 | - | - | |
Seca9g01015 | 391 | MobiDBLite | consensus disorder prediction | 263 | 288 | - | - | |
Seca9g01015 | 391 | FunFam | MYB transcription factor | 121 | 172 | - | - | |
Seca9g01015 | 391 | CDD | SANT | 124 | 165 | IPR001005 | - | |
Seca9g01015 | 391 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 168 | 222 | IPR017930 | - | |
Seca9g01015 | 391 | SMART | sant | 120 | 169 | IPR001005 | - | |
Seca9g01015 | 391 | SMART | sant | 172 | 220 | IPR001005 | - | |
Seca9g01015 | 391 | CDD | SANT | 183 | 215 | IPR001005 | - | |
Seca9g01015 | 391 | MobiDBLite | consensus disorder prediction | 263 | 279 | - | - | |
Seca9g01015 | 391 | ProSiteProfiles | Myb-like domain profile. | 168 | 218 | IPR001005 | - | |
Seca9g01015 | 391 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 116 | 167 | IPR017930 | - | |
Seca9g01015 | 391 | PANTHER | MYB PROTEIN-RELATED | 121 | 271 | - | - | |
Seca9g01015 | 391 | Gene3D | - | 120 | 172 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca9g01015 | Seca-Chr9 | 19223418 | 19225086 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca9g01015 | 91 | 287 | MYB Transcription Factor Family | AT5G17800 | 57.658 | 8.71e-70 | 221 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Seca9g01015 | Myb_DNA-binding | 6.2e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca9g01015 | K09422 | - | jre:109000849 | 400.593 |