Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00957 ATGAGGAATTTTAATTTTCCTAATTTGGATGTTTCTTATAATTTTTATAATACTTGGTATGGAAAAATGAAGGGGTTCTCAGCACGAAAGGGCAAAGAACGTAAAAATGCAATGGAAGAAATTATTGAGAAGACGTATCTATGCCATAGGGAAGGAAAGATACCAATTAATACGAATGAAAAGATGGGGAAGAAAAAACGTGAAGCAAAGCCTGAGACAAGGTGTTTATGTCCTGCAAAAATGAAGGTTAGGTTAGATGTACATTCTGGCCGTTGGAACGTGACCAAGTTTTGTGATGCCCATAATCATGAAATGCTAAACCCCAAATACACAGGGATGCTACCGGATCATAGGAAATTGAGTGAAGCCGATATCTTGGAGATGAATAACATGCGGAATGCAGGTATTACTACACCTCAAATTTATGGGTCATTTTCCAGCCAATCTGGTGGGTACAACAATGTTGGTTTTCGGAAAAGAGATCTTTACAATGAGATTGGTAGGCAAAGAATGTTACAGCTAAGTGATGCTAAGGGTGCAATTAAGTACCTACGTGAAAGGGAGCAGAATGAAGGGTCAATGTTTTGGAGGCACACGACTGACTCTGAAGGCCGACTCCAGCGATTATTTTGGTGTGACGGTCAGTGCCAAGTTGATTACAAATTATTTGGTGATGTCCTTGCCTTTGATGCCACACACCGTAAGAACAAATATCATTTTCCTTTGGTAGTTTTTTCGGGCATAAATCACCATAATCAAAGTACAATATTTTCTAGTTGCCTAGTTGCAGATGAAACTGAGGAAACTTATGTGTGGGTTTTGGAACAGTTGATGGTGGCAATGAAAGGTAAGATGCCTTCAGCAGTGATAACAGATGGTGACCTTACTATGCGGAATGCTATCAAAAGAGTGCTTCCTAATGCACACCATAGGCTTTGTGCATGGCACCTATGTCGTAATGCTGCCAGTAATGTTAAAAATCCTAAGATGGTTTCGATGTTTAGGAAATGTATGTTGGGTGACTATGAGGTGTCTGAGTTTAAACATAGGTGGGAGGTAATGGTGAAGGAATTTCGACTTGAGGAAAACAATTGGGTGAAGGAAATGTATGAGAAAAAGAGGATGTGGGCCACAACATACATAGGGGGAAATTTCTTTGTAGGGTTTAGGAAAACGTCTCGATGCGAGGGGCTGCATGGGCAACTTGGAAAGTTTGTTCACTCTCGGACCGATTTGGTTGGATTTCTGAAAAATTATGGTCGTTTTCTTGAAGTACTAAGGTATAATGAGTTAGAAGTTGATTTTGAGTCAGTACGTGGTGATATGGTCCTTGAGACTAACTTGCATGCACTAGAGAGATCAACCTCTAAGATTTTCACAAAGGAGGTTTTCATATTGGTACGTCCCGCCCTTGCTAGGGGAAGCACTATGAGGGTCATGGGCTGTACACAGCTGATGTCACAAACCATTTTTACAGTGACCAAGTATGGTAGATCACAAAAGGAGTGGCAAGTGTCATATATTCCAGAACCACTGTTCCTTAAATGTTCTTGTCAAAGAATGGAATCTTTTGGACTTCCATGTGATCACATAATCGGTGTGATGGTACACTTGAACATACAAGAGATGCCGAAATGTCTTGTGCCGAGTAGGTGGACCATGGGTGTGAAGGATAGTGCTTATGAAATTAGGGATGGACGCAACTCGATTTGGGATTCTGTGTTCGATGCACGTTGTGGTTATTTGGACTTTTTGTGTAAGAAGATGAATAGATTGGGGGGTAGATCTGCTACAACATTCAATGAGATTAAGGACTGGGTTAGCAGTAAAATAAACTTGTATAGTGAAGCACATATGAATAGTGGTCATGGGAATGAAAATGGTACAGATGAAGGTGGTCCAACATTGAAAGATCCAATTAGAGTTGCTTCAAAGGGGTGTGCAGCTGGTTCATCGTCACAATCAAGAAGACGACCTCATAAATGTAGGCAATGTGGTGTTGCTGGTCACAATCGAACTACTTTTCCAAATAAAAGGAAATATGAGGCGTCTATTGAGTCGGGAGAGGTTAGTATTCCTTTGAGTAATTTTTTTTAA 2097 0.4044 MRNFNFPNLDVSYNFYNTWYGKMKGFSARKGKERKNAMEEIIEKTYLCHREGKIPINTNEKMGKKKREAKPETRCLCPAKMKVRLDVHSGRWNVTKFCDAHNHEMLNPKYTGMLPDHRKLSEADILEMNNMRNAGITTPQIYGSFSSQSGGYNNVGFRKRDLYNEIGRQRMLQLSDAKGAIKYLREREQNEGSMFWRHTTDSEGRLQRLFWCDGQCQVDYKLFGDVLAFDATHRKNKYHFPLVVFSGINHHNQSTIFSSCLVADETEETYVWVLEQLMVAMKGKMPSAVITDGDLTMRNAIKRVLPNAHHRLCAWHLCRNAASNVKNPKMVSMFRKCMLGDYEVSEFKHRWEVMVKEFRLEENNWVKEMYEKKRMWATTYIGGNFFVGFRKTSRCEGLHGQLGKFVHSRTDLVGFLKNYGRFLEVLRYNELEVDFESVRGDMVLETNLHALERSTSKIFTKEVFILVRPALARGSTMRVMGCTQLMSQTIFTVTKYGRSQKEWQVSYIPEPLFLKCSCQRMESFGLPCDHIIGVMVHLNIQEMPKCLVPSRWTMGVKDSAYEIRDGRNSIWDSVFDARCGYLDFLCKKMNRLGGRSATTFNEIKDWVSSKINLYSEAHMNSGHGNENGTDEGGPTLKDPIRVASKGCAAGSSSQSRRRPHKCRQCGVAGHNRTTFPNKRKYEASIESGEVSIPLSNFF. 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00957 698 PANTHER OS01G0519700 PROTEIN 5 573 - -
Seca9g00957 698 Pfam MULE transposase domain 226 320 IPR018289 -
Seca9g00957 698 ProSiteProfiles Zinc finger SWIM-type profile. 491 539 IPR007527 GO:0008270
Seca9g00957 698 Pfam SWIM zinc finger 506 539 IPR007527 GO:0008270
Seca9g00957 698 SMART 26again6 514 541 IPR006564 GO:0008270
Seca9g00957 698 Pfam FAR1 DNA-binding domain 14 106 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00957 Seca-Chr9 18291622 18293718 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca9g00957 MULE 5.3e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00957 - - tpra:123913749 675.241