Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00918 ATGGCTGGAGGTGTTATCCAACAGTTACTGAGGAGAAAACTCCAATCTCATTCTCCGAGTTATTCTTTGTCATCCATTGTCACAAAGAAAGACGGTGCTGGCTCTACTGGCAGCAGCTCCTTAAGAGCCCTTGCGCTAATTGGAGCTGGTGTCTCTGGTTTATTGGGTTTTGCGACAACAGCATCAGCTGATGAAGCTGAGCATGGCCTGGCATGTCCAAGCTATCCATGGCCTCACAAGGGCATCCTCAGTTCATATGATCATGCTTCGATTCGCCGTGGTCATCAAGTTTATCAACAAGTCTGTGCTTCCTGTCATTCTATGTCTTTGATATCATACCGTGATTTGGTTGGTGTTGCTTATACGGAAGAAGAGGTAAAAGCGATGGCAGCTGAGATTGAGGTGGTTGATGGCCCTAATGATGAGGGTGAGATGTTTACACGCCCTGGTAAACTCAGTGATCGCTTTCCTGAGCCATATGCAAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCCTATCCTCCAGATCTAAGTCTTATTACCAAAGCTCGTCACAATGGTCAAAACTATGTGTTTGCCCTTCTAACTGGTTATCGTGATCCCCCTGCTGGTGTTTCGGTAATTTCCTCTCTTAACATTTTTAAAAAACTAAACTCTAATTGTTGA 669 0.4499 MAGGVIQQLLRRKLQSHSPSYSLSSIVTKKDGAGSTGSSSLRALALIGAGVSGLLGFATTASADEAEHGLACPSYPWPHKGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPEPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSVISSLNIFKKLNSNC. 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00918 222 Gene3D - 66 219 IPR036909 GO:0009055|GO:0020037
Seca9g00918 222 PRINTS Cytochrome C1 signature 95 114 IPR002326 GO:0009055|GO:0020037
Seca9g00918 222 PRINTS Cytochrome C1 signature 173 197 IPR002326 GO:0009055|GO:0020037
Seca9g00918 222 PRINTS Cytochrome C1 signature 75 94 IPR002326 GO:0009055|GO:0020037
Seca9g00918 222 PRINTS Cytochrome C1 signature 140 160 IPR002326 GO:0009055|GO:0020037
Seca9g00918 222 SUPERFAMILY Cytochrome c 70 212 IPR036909 GO:0009055|GO:0020037
Seca9g00918 222 ProSiteProfiles Cytochrome c family profile. 89 196 IPR009056 GO:0009055|GO:0020037
Seca9g00918 222 PANTHER CYTOCHROME C1 32 211 IPR002326 GO:0009055|GO:0020037
Seca9g00918 222 Pfam Cytochrome C1 family 77 212 IPR002326 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00918 Seca-Chr9 17382432 17391021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00918 1 213 Chloroplast and Mitochondria Gene Families AT3G27240 80.282 3.11e-116 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00918 K00413 - gmx:100803087 382.104