Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00897 ATGCTTTGTTTTGACCACCATTCCAAGCTTGTTTCACAAATTCACAATGAACAAACATTCGATTGGGGTGACTATGAATATGATGATGATCACCATGTAATCTACTCTCTCCATGAATGTCGCACTTCAGAAGGGTACAAGAAGTTAGATGTTGATGCTGACCACATGAGGAGGAACATCATAGATTGCTTGATAGCCACACACTATGGATTAGAGCTTAGGCCAGAAACCCTTTATCTTTGTGTCAACATTCTTGATCGTTTTCTTTGCAAAACCAAGTTTGATAAATCAACAACAAAGAAGGAATTGGTGCTTGTGGCTGTTACCTCATTATTGTTGGCTTCAAAATATGAACAACAAGGGTCACTCTCTGTTTCTGCTTTGGAGTACATAACACAAAATTCTTGCTCACAAGATGACATACGTCGCATGGAAATTGTTATACTTTCAAAGCTTAATTGGGTTTTGACAGTTCCAACTCCTTATGTCTTTCTTCCTAGGTACATGAGGGCATGTCTTTTATATGATGATGACATGGACATGAACATGATCATGGAGAACATGGTGTTTTTCTTATCTGAACTCAGCTTGACACACTATCCCATTATCAGTCACTATATGCCTTCTTTAATTGCAGCTTCTGCTGTGTATTGTGCCAGATATATTGTTGGAAGGTCCCCTTTTTGGAACAAGAATCTGAAGAACTATTCTGGGTATTCTAAGAAGGAGTTGAGTTCTTGTGCCAAGCTTATGCTGGAATTGTGCAGGGTAACTTGTAGAGATGGGAACATGCAAGTTTTTAAGAAATTCTCTAGTCCAAATCATTTTAAGGTTGCATATTTTGCTCAGCAACAACTCTCCTCCAAGAATCATTCTGGTCTTAAAATTCATGTCAAGCGCGCCTCAAGACGGTTCTTGATGAGATCGAGATCGAGAACCGGTTGGAGCAAGCTCGACAAATGGATGCGGCACGTGACCAAGAACAGGCGCGATAGCGCGCGGAGCTTCACTCCCAAATGGAACCTTTTGCTCAAAGGCAGGCCCTTGAAGGGGTTCAGAATACCCTCCAGCTTGAATTTGAATATGATCCTTAGGCTAAGGTTGGTTGTTGATATAGCTAGAAAGTTCAGTACCAATTTCATAGGCTTCTTTTTCTTAATTCAATTGCTCTCATTCTGCAATTTATGTAGTTAA 1194 0.4012 MLCFDHHSKLVSQIHNEQTFDWGDYEYDDDHHVIYSLHECRTSEGYKKLDVDADHMRRNIIDCLIATHYGLELRPETLYLCVNILDRFLCKTKFDKSTTKKELVLVAVTSLLLASKYEQQGSLSVSALEYITQNSCSQDDIRRMEIVILSKLNWVLTVPTPYVFLPRYMRACLLYDDDMDMNMIMENMVFFLSELSLTHYPIISHYMPSLIAASAVYCARYIVGRSPFWNKNLKNYSGYSKKELSSCAKLMLELCRVTCRDGNMQVFKKFSSPNHFKVAYFAQQQLSSKNHSGLKIHVKRASRRFLMRSRSRTGWSKLDKWMRHVTKNRRDSARSFTPKWNLLLKGRPLKGFRIPSSLNLNMILRLRLVVDIARKFSTNFIGFFFLIQLLSFCNLCS. 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00897 397 Gene3D - 50 150 - -
Seca9g00897 397 PANTHER CYCLINS 26 263 IPR039361 -
Seca9g00897 397 SMART cyclin_7 163 253 IPR013763 -
Seca9g00897 397 SMART cyclin_7 62 150 IPR013763 -
Seca9g00897 397 SUPERFAMILY Cyclin-like 26 154 IPR036915 -
Seca9g00897 397 SMART Cyclin_C_2 159 284 IPR004367 -
Seca9g00897 397 Gene3D - 151 294 - -
Seca9g00897 397 SUPERFAMILY Cyclin-like 158 283 IPR036915 -
Seca9g00897 397 Pfam Cyclin, C-terminal domain 159 282 IPR004367 -
Seca9g00897 397 Pfam Cyclin, N-terminal domain 47 156 IPR006671 -
Seca9g00897 397 FunFam G2/mitotic-specific cyclin 44 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00897 Seca-Chr9 17178956 17180149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00897 54 279 Core Cell Cycle Gene Families AT2G26760 39.823 1.34e-49 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00897 K21777 - cave:132164002 192.971