Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00887 ATGGCTTCTTCTTTCACCTCCCTACTACTTATGGTTCTCTTGGCCATTTTGTCTGGTCCACAATGTTTTTGTTTGGCTTCCCAAGAGTTCCAAGTGGGTGGCTCAAAAGGGTGGGTTGTCCCACCTGCCAATGACACCAACATCTACAATGAATGGGCTTCCCACAACAGGTTCCACATCGGTGACTCCATCCAGTTTAAGTACAAGAAGGACTCTGTGATGGAAGTTGGTGAGGTAGATTATAAGAACTGCAATGCAACTCATCCAACCTTCTTCTCCAACAATGGCAACACTGTGTTGAGGTTAGATCACTCAGGGACTTACTACTTCATCAGTGGTGCTTCAGGACACTGCCAGAAGGGACAGAAGATGATTGTGAGGGTTATGGTTCCTGGTAGTGATGAGTCTCTTCCTCAACATGCCAAGTCTTCAGGGTACCATGGTCCAATTGGGGTCTCTGAAATGCTCTTCCTTCAGTTTGTTTTGACATGTAGTTTTGCTTCCTATGTTATTTGA 516 0.4535 MASSFTSLLLMVLLAILSGPQCFCLASQEFQVGGSKGWVVPPANDTNIYNEWASHNRFHIGDSIQFKYKKDSVMEVGEVDYKNCNATHPTFFSNNGNTVLRLDHSGTYYFISGASGHCQKGQKMIVRVMVPGSDESLPQHAKSSGYHGPIGVSEMLFLQFVLTCSFASYVI. 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00887 171 CDD OsENODL1_like 29 129 IPR041846 -
Seca9g00887 171 Pfam Plastocyanin-like domain 47 122 IPR003245 GO:0009055
Seca9g00887 171 PANTHER BLUE COPPER PROTEIN 26 134 IPR039391 GO:0009055
Seca9g00887 171 SUPERFAMILY Cupredoxins 28 129 IPR008972 -
Seca9g00887 171 Gene3D - 26 132 IPR008972 -
Seca9g00887 171 FunFam Early nodulin-like protein 1 27 133 - -
Seca9g00887 171 ProSiteProfiles Phytocyanin domain profile. 28 130 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00887 Seca-Chr9 17091188 17091950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00887 24 129 Phytocyanin Superfamily AT3G18590 57.009 4.08e-45 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00887 - - gmx:100815728 249.98