Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00857 ATGCAAAGTTGCGTTCTTTTTGCAGAGACTTCTGATTTGCACGGTTCCCTTTTAAGGGCTTTCCTTGTGCATAGTCACTTGTCTTGTCTCTTCTCTTCTTCTGTTGTTCTCTTTTCAAGTGCTGTGGAAATGAATGATGCTAGTGGGAAGGGTTCTTCTTGTTTGGCCATTACGGAGAAGAAGAATCACAGGCCAGGTGGTTGCATTGGTATTTTCTTTCAGCTCTTTGATTGGAACCGTAGGCTCACTAAGAAGAGGCTCTTCTCCAAGAAACTTCTTCCTCCTGCTCGTGCAAAACAAGCTTCTTCAAAGAAGTTTAAAGGAGATGAGAAAATGCCAAATTCCAAGCTCCACTTGATTGCTAATGAGAACAATGGAGGTTTCCCAAATGCCAAAAAAAGTGGGAATCGTGTTATGGATGTAGAACAGAAGCATGAAATGCGAGTTCCTAGTCTGGTTGCTAGGTTGATGGGTCTAGAATCTATTCCAGCTTCACAGAGAGATAGGACAAAAAGTTCTTCCTTTTCTGATGGGGAGGAGAAGGATTCTTTGGATGATCATAGTAGTGAGGGTGATAAGCAAGGGGTGGATTTGGAAATGGGAGTTGCAAATGCAAAGCATGATTCAAGACCTCAGAAGCTTCAGAAAACGGGGACATATGAGAGAAAGGCAGTGACTAGGTTTGGCGCTGAGGCAATGCAAATTAAGAGTGTTTTGTCACAAGTAAAAAAGTATAATCACCATCACAATAAACTTGCTTCTCCTTTGAAGAGTCCAAGAATTACTTCCAGAAAGAGTGCATCTCGAAGCTCTAGATTAATAGAAGCAGCTACTAAGATCTTGGAACCTGGATTGCAGGCTACAAGCAGAACTAAATATTCTCTTACATCTTCCACTTCCATTTATCCTCCCAATAATGGCATTGTGACAGAAAGGGTGGGAACTAAGGCAGTAGATAAACAAAATCAACCAAGTTATGATGCTAGTAAAGGCAAGCCTTTGATGGGGCATGCCTCTTGCAAAAATTGTGGTAATTTGTTTGATGTTGTTGATTGCAGGCCAGAGGTTGAGATCAGCACACCTATTGTTTCAGATGTTTTCACTGCCTCCTCTTTGGTATCAGCACAGGAAGGAAGGCCATTTGTCCCTTCTCATGAAAATGATGTAGTTCTTTTGAGAAGCCAGGAGAAGATCATCACTCTTGTTCATGAAGATGGAAAAAATGATTCACAGTCTTGTAATGAATCCACTACCAGAAGAATGCCTGTACCTTCTAAATGGGATGAGGCATCTTCTTTTGACTTCAAACACAAAACTCAAATACAAGAACGGGTGTTAAGGGGTGAAAAGATTTCATCTGGATCTAGAACAAGTAATATGCAAGAGAAGAGAGTATCATCAGCTGCAAGCACTGTGAGTGGGACTAAAGACTTTGTTGCTTTGAATAGAAGCCTAAGTGGTCGAACTAGGATGAGATCTCCTACCAAGGTGGATAGTTGCAAATTTGATCTTGAGAGGAAACCTCCTAATAGAAAGAATGATTCTTTATCTCGTGTAAGCACCTTAGAGAGAAAAAGAAGGACCCCAAATGTTTCACAAGTTGAAGCTACAGCTCCTGTTAATTTGGTTACAATGAAACAGAGAAATGCTGGTTCTGATGCACAAGGGGGAAAAAGGAGGAGTTTTGATACTTCCTCCCCAAACAAGTATAATGTCAAAAGTAAACAAGGTAGTCAGCTTAAAACAGAAAGTGTCAGTGACAAAAAGGTCAATGAGGTGGTTTCATTCACCCATAGTTCCCCCTTTAAGCAAAAGATAGTAATACCAGGTGGAAAGGAAGAGACTAGCAGTGATAATGAGAATAAGATTTATTTGCAAAGATCTCCACCCTTGAGAGCAGATGCTTTAGGTGCCATTCTAGAACAAAAGTTGAAGGAATTGGCTACTGGTGGTCCACCTAAAAAATCAACTGCCATGATTCTTCAAGAACTGATATCTGCTCTTAAGTCAGAGCATCTAACATGTTCTGATGATCATATGTTAAATGACAAGCATGAGGCAAATCATGTACGATTGTTAGGAACCTCTTGCAATAGCAATCATCTCAGTCCTGGATCTGTTCTGGAAGCTTCCTTTTCTTCCAGTAGTCTGGATGAAGGATCAGGGCATGGATATCACCCTGACTCTATGGATTGCTCGTATAATCAACAGGAGCAATTGGAACATGATACTGAACTTTTGGATTCTGCAACATCATTTAACAAAGGGGGGATAGGTTATGAGATACTGACTGAACTTGTCAACCATATTCATAGGACATTGCAAAGTTTAAATTTTTTTGGGACAAGATTGACAGAAAACAAGCTCACCCATATAAAAGAAGTTATCTTAAATGCTGAATTAGTTCTTGGAAATGCCACTGAGCACAATGAGGATGGGGTGCCACAACTTCTCATTTCTTGCGTCCTGCTTAATGAACTGGACACCATGGCAAGTGATGATGCTATGTGGAGAGATTTTAATGGCTTTGTGGGTTGTGAGGATTCTAAAGACAGAAACCAACACAAGGGATTTCTATTTGATTGTGTAATAGAATATCTAGAATCAATTTGCTGCCAACATTATAACAGTGTATTTAAGGCATGTACTGCATGGACAAAGCTGCCTTTATGCATGAAAGCTGAAATGTTGGTTCAAGAAGTCAAGAGTGAGATTAAGAAGTGGGCATGCATGGTTGAGATGGTACCTGACCAAATAATAGAATGGGAGATGAGCCACTCCTTGGGGAAATGGACTGATTTTAATATTGAAGCATTTGAGGCTGGTGTTGATATAGATGGGGATGTACTTCAAATTTTGGTTGATGAAATTGTTGAAGACCTTGTAGATTCTAGGCAAGGCAAGCTACTCAAATTCCTGTAA 2922 0.4021 MQSCVLFAETSDLHGSLLRAFLVHSHLSCLFSSSVVLFSSAVEMNDASGKGSSCLAITEKKNHRPGGCIGIFFQLFDWNRRLTKKRLFSKKLLPPARAKQASSKKFKGDEKMPNSKLHLIANENNGGFPNAKKSGNRVMDVEQKHEMRVPSLVARLMGLESIPASQRDRTKSSSFSDGEEKDSLDDHSSEGDKQGVDLEMGVANAKHDSRPQKLQKTGTYERKAVTRFGAEAMQIKSVLSQVKKYNHHHNKLASPLKSPRITSRKSASRSSRLIEAATKILEPGLQATSRTKYSLTSSTSIYPPNNGIVTERVGTKAVDKQNQPSYDASKGKPLMGHASCKNCGNLFDVVDCRPEVEISTPIVSDVFTASSLVSAQEGRPFVPSHENDVVLLRSQEKIITLVHEDGKNDSQSCNESTTRRMPVPSKWDEASSFDFKHKTQIQERVLRGEKISSGSRTSNMQEKRVSSAASTVSGTKDFVALNRSLSGRTRMRSPTKVDSCKFDLERKPPNRKNDSLSRVSTLERKRRTPNVSQVEATAPVNLVTMKQRNAGSDAQGGKRRSFDTSSPNKYNVKSKQGSQLKTESVSDKKVNEVVSFTHSSPFKQKIVIPGGKEETSSDNENKIYLQRSPPLRADALGAILEQKLKELATGGPPKKSTAMILQELISALKSEHLTCSDDHMLNDKHEANHVRLLGTSCNSNHLSPGSVLEASFSSSSLDEGSGHGYHPDSMDCSYNQQEQLEHDTELLDSATSFNKGGIGYEILTELVNHIHRTLQSLNFFGTRLTENKLTHIKEVILNAELVLGNATEHNEDGVPQLLISCVLLNELDTMASDDAMWRDFNGFVGCEDSKDRNQHKGFLFDCVIEYLESICCQHYNSVFKACTAWTKLPLCMKAEMLVQEVKSEIKKWACMVEMVPDQIIEWEMSHSLGKWTDFNIEAFEAGVDIDGDVLQILVDEIVEDLVDSRQGKLLKFL. 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00857 973 MobiDBLite consensus disorder prediction 483 585 - -
Seca9g00857 973 MobiDBLite consensus disorder prediction 713 732 - -
Seca9g00857 973 MobiDBLite consensus disorder prediction 446 471 - -
Seca9g00857 973 Pfam Domain of unknown function (DUF4378) 789 956 IPR025486 -
Seca9g00857 973 MobiDBLite consensus disorder prediction 494 530 - -
Seca9g00857 973 MobiDBLite consensus disorder prediction 451 471 - -
Seca9g00857 973 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 54 960 - -
Seca9g00857 973 MobiDBLite consensus disorder prediction 531 551 - -
Seca9g00857 973 MobiDBLite consensus disorder prediction 558 585 - -
Seca9g00857 973 MobiDBLite consensus disorder prediction 172 194 - -
Seca9g00857 973 MobiDBLite consensus disorder prediction 406 425 - -
Seca9g00857 973 Pfam DUF761-associated sequence motif 142 168 IPR032795 -
Seca9g00857 973 MobiDBLite consensus disorder prediction 160 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00857 Seca-Chr9 16730222 16735143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00857 54 961 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 33.263 1.15e-104 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00857 - - gmx:100813026 1101.66