Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00825 ATGTTTACTGTTAACAGATACGAGGAGATACTACTCACTATGATGCAGTTGCTAATTCAGCAGCATTTGGAGTGCTTTCAGCCGGTCTTAACTCAGATGACAACAACAATTGCTATAGAGGATGTAAGGAGAGAAGTAAAGATATTGCGAGCTTTAACTGGGCATAGGAATTTGGTGCAGTTCTATGAAGCCTATGAAGATGATGACAATGTTTATATAGTTATGGGGTAA 231 0.3853 MFTVNRYEEILLTMMQLLIQQHLECFQPVLTQMTTTIAIEDVRREVKILRALTGHRNLVQFYEAYEDDDNVYIVMG. 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00825 76 FunFam CDPK-related kinase 1 34 76 - -
Seca9g00825 76 ProSiteProfiles Protein kinase domain profile. 1 76 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00825 76 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 75 - -
Seca9g00825 76 Gene3D Phosphorylase Kinase; domain 1 15 76 - -
Seca9g00825 76 SUPERFAMILY Protein kinase-like (PK-like) 35 75 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00825 Seca-Chr9 16210976 16211854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00825 32 75 EF-hand Containing Proteins AT3G50530 81.818 9.58e-20 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca9g00825 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00825 - - vvi:100246588 85.8853