Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00823 ATGGTCGAACATGATGGTGCTCAGTGCTCGGGAGAAGAAAGGAACTGCTTGGGGGTGTGGGAGTTGAGGGAGAGGGGGTTGGAGAAGTGCACAGAGAAGGCAGGGAGGGGAGTGGGGAAGAGGGAAGGGAGAGGACAATGGGGGAAAAGAAAGGGGGAGATGGGTGGGGTGGGGATTGAGGCGAAGAAGTGGAGAGGCCAAGAGGCTTCTGGAGAAAGAAGAGCTCACGTTCTACTTAATCTTGTGCTACATAGGTTATGCAAAGGAGGCGAACTGCTAGATAAGATTCTTTATAGGGGTGGCAAGTACTCAGAAGAGGATGCTAGAGTTGTTTTGATTCAGATATTAAGTGTGGTAGCTTACTGTCATCTGCAGGGTGTTGTTCACCCTGATCTCAAGCCCGAGGTAATTAGCTCATAA 420 0.5024 MVEHDGAQCSGEERNCLGVWELRERGLEKCTEKAGRGVGKREGRGQWGKRKGEMGGVGIEAKKWRGQEASGERRAHVLLNLVLHRLCKGGELLDKILYRGGKYSEEDARVVLIQILSVVAYCHLQGVVHPDLKPEVISS. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00823 139 SUPERFAMILY Protein kinase-like (PK-like) 85 135 IPR011009 -
Seca9g00823 139 Gene3D Transferase(Phosphotransferase) domain 1 71 137 - -
Seca9g00823 139 ProSiteProfiles Protein kinase domain profile. 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00823 139 PANTHER SERINE/THREONINE-PROTEIN KINASE 79 137 - -
Seca9g00823 139 Pfam Protein kinase domain 84 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00823 Seca-Chr9 16207939 16210478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00823 82 135 EF-hand Containing Proteins AT3G50530 74.074 1.28e-23 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Seca9g00823 Pkinase 2.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00823 - - cave:132162604 97.0561