Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00803 ATGGATCCTTCTCGGCGAACTCCACGCGCCGTGATCGATCCCGTCCCCAAGTTCCGCCAAGTCGGGTTCTTCGCTCCCGGAGCCCCACCAGAGCGCTCTCAATCGGGTCCACCCGACCCGACTCACTCTGCCACTCCCGTCCCCGACATCTCTCCCTCCCTCTCGCCGGTGATGATCCCGCCGCCGCGCCACCTCTCTGACAACCTCCTCCTCCACTCTCGTCCCGCCGCATCAACTCTCCGTGCTGACTCCATTACCGTCGGCGGCAGCAACTACGACGCTCCAGTGTCACCAGCCCCGTCGTCTTCCTACTCCAGCAGGATCGCCACCGTCGGTGATGGAAGCTTCTTTGCTGGCAGCGGTGGCAAGGGGAACGGTGCTGGAAAAGTGGCGGCGTCATCCTTTCCTCGCGGAGGATTCGACTTGACGGCGATGAAGGTGAGTATAGTTCCTGCCAGCGAATTGACCACTGTTTCCGTGGTGAATGATTCGCTTGGGATTCCCGAAAAAGAAAAGGCAAACAAAGGAGGAGGGTCAGCTGTGGAAGTCAAAGATCAACCTACTAGTTCAAAACAGCAGAAACCGAAAACCTCAAAAGCTGAAAGACGTGCTCTTCAAGAAGCTCAACGAGCAGCAAAGGCTGCTGCAAAAGCTGAAGGAAATAAGGCATCTGCAACTGCAACTTCAGTGAATGCAAAACCAGCTAAACCTGTAAAGCCTGCACAGAAAGTTGATAATGCAGCTGCAGCCTCTGAGAAGAAAGGGGGTGATTGTCCACCAGAAAAGGATAGAAAGAAAGATGCCCCTCAACCACGCATGCAGTATGATGACAAGAGTCGAGTGGAGAAAGCTAAACGCCGTGCTGTGGTGAAACAAACTGAAGCTAGGAGCAGAGTCGAGTTGTTCAGGCATTTACCACAATATGAACATGGGAGTCAGCTTCCAGATCTTGAGGCAAAGTTTTTCCATCTTCACCCTGTGCATTCTGCTGTTTATAAGCTCCATGAGTCCTTCTCAAAACAGTATGCATCAAGGTGTTTCACTTGTAGTAATACTCTTTTTCCACAAGGTCTTTTGGATAGTACCAACAAAAGGAGGGGGAACTGGGAGAAAGACCAAGTGGGTTTGCAGTATCTATCCGGAGATATATCTGGTGGCAATGCTCGTTGTATTGCAATGCTTCAAGCATTTCAAGAGGCCATCAAAGACTACAGTGTTCCACCTGAGAAGACTCTTGTGAGAGACTTAACAGCAAAAATTAGTAGTTACGTGTCATTTCTTATTGAGTGTCGACCTCTGTCAATCAGCATGGGAAATGCAATTAGATTTCTCAAAAGTCGGATAGCCAAGCTACCTTTAGCCCTGTCCGAGTCAGAAGCAAAAAGTTCTCTCCAGTCAGATATTGAGCGTTTCATAAGTGAGAAGATTGTACTTGCCAACAAGGTGATAGTCAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACTTATGGGTCATCATCAGCAGTTGAAATGATTCTTTTGCATGCACATGAATTAGGAAAACAGTTTCGTGTTGTGGTAGTTGACTCGCGTCCAAAACTTAGAGGGCAACTTTTACTTCGCAGGCTTGTGGAGAAAGGTCTTAGCTGTACATACACTCATATAAATGCTGTTTCCTACATAATGCATGAAGTTACTCGAGTTTTTCTGGGTGCTTCATCAGTGTTGTCTAATGGAACAGTATATTCAAGAGTTGGGAGTGCATGTGTTGCAATGGTTGCTCATGAATTCCATGTACCTGTCATAGTATGTTGTGAAGCCTATAAATTTCATGAAAGGGTACAACTGGATTCAATATGCTCGAATGAACTTGGTGATCCAGACGTCATTTCAAATGTTATGGGTAGAGAGGATATCAACTACTTGGATGGCCGGGCCGATATTGAAAATCTGCAACTTTTAAATCTAATTTATGATGCAACACCTTCAGATTATGTTTCAATGATAGTCACAGATTATGGCATGGTAAGTGCTGGAAGTTTAAACAGGAGTTATGCATTTGCCGCTAAAACATGCCTGCATTTGATCCTGGGCCTAACTGGGCTTTAG 2100 0.4681 MDPSRRTPRAVIDPVPKFRQVGFFAPGAPPERSQSGPPDPTHSATPVPDISPSLSPVMIPPPRHLSDNLLLHSRPAASTLRADSITVGGSNYDAPVSPAPSSSYSSRIATVGDGSFFAGSGGKGNGAGKVAASSFPRGGFDLTAMKVSIVPASELTTVSVVNDSLGIPEKEKANKGGGSAVEVKDQPTSSKQQKPKTSKAERRALQEAQRAAKAAAKAEGNKASATATSVNAKPAKPVKPAQKVDNAAAASEKKGGDCPPEKDRKKDAPQPRMQYDDKSRVEKAKRRAVVKQTEARSRVELFRHLPQYEHGSQLPDLEAKFFHLHPVHSAVYKLHESFSKQYASRCFTCSNTLFPQGLLDSTNKRRGNWEKDQVGLQYLSGDISGGNARCIAMLQAFQEAIKDYSVPPEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLALSESEAKSSLQSDIERFISEKIVLANKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGKQFRVVVVDSRPKLRGQLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGSACVAMVAHEFHVPVIVCCEAYKFHERVQLDSICSNELGDPDVISNVMGREDINYLDGRADIENLQLLNLIYDATPSDYVSMIVTDYGMVSAGSLNRSYAFAAKTCLHLILGLTGL. 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00803 699 SUPERFAMILY NagB/RpiA/CoA transferase-like 383 678 IPR037171 -
Seca9g00803 699 MobiDBLite consensus disorder prediction 255 289 - -
Seca9g00803 699 MobiDBLite consensus disorder prediction 31 45 - -
Seca9g00803 699 MobiDBLite consensus disorder prediction 162 289 - -
Seca9g00803 699 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 51 680 - -
Seca9g00803 699 MobiDBLite consensus disorder prediction 1 66 - -
Seca9g00803 699 Gene3D - 478 682 IPR042529 -
Seca9g00803 699 Pfam Initiation factor 2 subunit family 383 673 IPR000649 GO:0044237
Seca9g00803 699 MobiDBLite consensus disorder prediction 86 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00803 Seca-Chr9 15614807 15619323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00803 4 678 Eukaryotic Initiation Factors Gene Family AT5G38640 61.087 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00803 K03680 - gmx:100775998 942.184