Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00799 ATGCATGCCAAAGGTTCTTCATCATTTGTCCCAAACCTTCATCAGCAGAGAGGTTTTGATTTAAGTCAACAATATGTAAGAAATCAAGCAGGGTTCTGCACAGACTGGCGTACGCCTCCTGAGATGCGCTACAGCCGCTATTTCATTCGAAATAAAATTTCTGCTATTTTAAGTTCCAGCATTCATTGTGAGCAAGCAAAACAGTCATCTAAAATTGCAAATATTCTGGAACACCGGCTATTTATTCATGCTGCTTCAAAGGAGGATTATATGAACCAGGAGACTTTGGTACAGCGAGTGCAAACTCAACTCAATAAAATGTATAGGACAAAAGGCACTCAACAACAAGTTGACAGCTCTATTAATAACACATATAAGACAGTTCCTTCTTCACGGTTTTTGCATGCTTGGTCTAATGGAAGTCTCCCAGAACCTGCTCTTCAGAAAGCGGCTGCTCCTGCCATTAATGCCATTGATTATTGTGCAGTGAACACAAAAAATAAATACGACCTTCCAAAAGGAGGACTATTTAACACTTCGATTGTTCATGAGCCAGTGCTTTCTAACTTCTCTGTTTCTGGTGGTGGATGCAATCCGGAAGCCAGCTCCAAATCTATTATTTCCTATTTTCCTCGGCAACATGCTGATGATTTGGAGATGGATCTGAAAAAATACAGTTGTTTGGGGACCATCCAGAAAAATGAGTCCATGGCTTTTCATTCCACAATGGGACCCCTCCAATCTGAATCTCTAAATTTGATGATCTCTCAACATGTCTCAAGGGAAAATTTGGAAGGTTCCAATCTTCTTCCTGCCTTGATGCAGCCATATGACCTTTGTGATAAAGCTTCTACTGTCCAGTATATGCTACCACCTGACAAAAGACTAGAGATGGAATCTGCTTTTGGTGTCTCTTTGATGAATAATGCGAGTTCTGATCAATGGACTCACAAGATGGCTCTACCCTATTCTTCTGAAGCACCTTTTGGTAATTCTGAGGCCATGCTTCCACCTGCCAAAAGACAAAAAATGGACTCTGCTTTTGGTGTCTCTTTGATGAAGAATGCAAGTTCTGATCAATGGACTCACAAGATGGCTCAACCTTATTCTTCTGAAGCACCTCCTGGTAATTCTGAAGCCATGCTACCACCTGACAAAATACTAGAAATGGAGTCTGCTTTTTGTGTCTCTTTTATGAATAATGCAAGTTCTGATCAATGGACTCACAAGATGGCTCAACCGTATTCTTCTGAAGCACCTTCTGGTAATTCTGAAGCCATGCTACCACCTGACAAAATACTAGAAGTGGAGTCTGCTTTTGGTGTCTCTTTTATGAATAATGCAAGTTCTGATCAATGGACTCACAAGATGGCTCAACCTTATTCTTCTGAAGCACTTCCAGAATTACAGCAACAGTCAGAATCTCCCCCTATCCATTCTGAAGTTACAGAGTGCAGTGCAGAACAATTTACAAATTCGATGCTTGATTCCATTAGCATTGGTGAGATAAAGAACAGTGGAATTGATGATACATTTGGACAGTCTTTCAAGAGAGAAACAATTCCCTCTAAAGGCTTAGAAGTTGATCATATATCAGAGGAGCCAGACCCCAAAAGCCATAATATGATAAACAGCAGCAACTTAGAGGAAACTGTCATTAGATTGAATTCCAGTGTGCATACTTTCTGCAAAGATCCTATTGCTGCAGATATAGAGGACATACAAGGCAAAACTGGATTCAACCAGGCTGAGATAAATGGTGAAAAGAAAGTCATTGAGCCAAAAGCTGATCAAGAGAAGGAAACAAAGACCTCAAATACAGCAATTAGTGAGATAAATGGACTCACTAACTGCTTGATTAATAATTCAAGTTCTGATCAATGGACTCACAAGATGGCTCAACCTTATGCTTCTGAAGCACTTTCAGAATTGCAGCAACATTCAGAATCTCCCCTCTCTTCTATTGATTCTGAAGTTACAGAGTTTAATGTGGAACAATTTACAAATTCAATGGTTGATTCCATGAGCATTAGTGAGATAAAGAACAGTGCTATTGATGATACATTTAGACAGAATTTCAAGAGTGAAACAGTTCCCTCTGAAGGCTTAGAAGCTGGTCATATATCAGAGGAGCCAGATCCCAAAAGCCATGATGTTGTAGACAGAAGCAACTTAGAGGAAACTGTCATTGGATCGAATTCCAATAAGCATACTCTCTGCGAAGATCCTATTGCTGCAGATATAGAGGACATACAAATCAAAACTGGATCCAACCATGCTGGGCTAAATGCTAAAAAGGAAGTCAGTGAGCCAAAAGTTGATCAAGAGAAGGAAACAAAGTCCTCAAATACAACAGTTAATATTGTTTCCTTAACTGATTCCTTCACAAGTACTCAAATCATGGAACACATTAAGGGTCTGAGAAAGAAATTTGTTCAGGGCATAAGTGAGGAAGAAACAGGAATTGCTGCTAGCACATGCCAATTATGTGCAATGGAAAAGCTTTTTTTTTCACCAGTGCCAATTTATTGCTTATGTTGTGGCAGCCGGATCAAGAGAAATGGAAACTATTACTGTAAGAAAGCAGAAGAATTTGATACACAACATTGCTTTTGCAACCTCTGCTATAAAAATTCTCGAGGTGGGTCAATCACATTCAATGGACTATCTGTTTCCAAGACACTTCTTGATAGAAAGAGAAATGATGAAGTACTTGAAGAAGCGTGGGTTGAATGTAATAAATGCAAAAGATGGCAACATCAAATATGTGCACTCTACAACAAAAGAAGAGATTTAGACCGCAGTGCTGAGTATATATGTCCTATATGCCGCTTAAAGGAAATTGAAAATGGAATGCATGTACCCTATCCAAAGACTGCTATTTTTGGTGCTAAGGACTTGCCAAGAACCATGCTTAGTGACCACATAGAGAAAAGACTTTTTAAGCGTCTCATGCAAGAGAGAACAGACAGGGCAAAAGCTGAAGCGAATAAGAATTTTGATGAGGTTTTAGCAGCAGAAAATCTTACTGTTAGAGTAGTGTTATCTGTTGACAAACAATTGAAAGTGAACAAGCAGTTTCTGGACATCTTTCTGGAGGAAAATTACCCTGCTGAGTTCTCTTATAGATCAAAAGTTATTCTTCTGTTTCAGCAGATTGAAGGAGCAGATGTATGCCTTTTCGGAATGTATGTCCAGGAGTTTGGCTCAGAATGTGGCTATCCCAATCAGCGTTGTGTATATATTTCATATCTTGATTCCGTTAAATATTTTAGGCCTGAAAGCAAGACTGTGAAAGGAGAAGCTCTTCGTACCTTTGTTTACCATGAGATATTGATTGGATACCTTGATTTTTGCAAGAAAAGAGGTTTCACAACTTGCTACATATGGGCCTGTCCTCCTTTAAAGGGGGAGGATTATGTACTATATTGCCATCCTGACACTCAAAAGACTCCTAAGAAGGATAAACTTCGGCACTGGTATCACTCAATGCTAAGAAAGGCTGCTGAGGAAAATATCGTTGTTGGTTTAACCAACATATATGATCATTTCTTTGTTCCTACTGAAAAATGTGACTCCAAGATAACAGCTGCTCGTTTGCCATACTTTGATGGAGACTACTGGTCTGGTGCTGCTATGGATCTAGCCAGGAACATTGAACAGGAGAGTGGAGGAGAGTGTGAAAAGACATTGAAACTAGTAACAAAAAGAACTTTAAGGGCCATGGGACACGTAGGTCCTTCAAAAGGCACTGTCAAAGACATTCTAGTGATGCAAAAGCTGGGCCAAAATATTTTGCCTGTCAAGGAAGACTTTATCATAATTCAGCTTCAGCATACATGCGTGCACTGCCATAAAGTCATAGTGTCTGGGAAGCGGTGGTTTTGCACTGAATGCAAGAAATTTCAGGAGTGTGAAAGATGCCATACTGCTGACTCACACACTTCAGTTAGTGGCGAGAAGCATATACTTTGTCAGGTTTTCATGGATGATATTCCTGCTGATACTAGAGAGAATGGTATCATCCTTGATAATGGATTATTTGAGAATAGGAATAACTTTTTGAGCTTCTGCCAAAAGAATTATTTTCAGTTTGACACACTCCGCCGTGCCAAGTATTCCTCAATGATGATCCTCTACCATCTAAAGAGTCCTACTATGCTGACTATTGGAACAATGTGTAGCATTTGCTGTAAACACTCTGTCTTCCAACAGAGCTGGAAATGTGAGATTTGCCCCGAGTTCACTGTATGCTCTGCATGTTATAACGAGAGAGGTGCTAAATCCCATGCACACAAGTTGAGTCAAACTAACTCAACAGCATTATGTCTCTCTGGGAATGAAGAGTCAAAGCAGAAATCAGTACTGATGCAGGAACTGCTAGAAGTTTTACAGCATGCATCTCAATGCCGCTCAACTAAAACTCAACCGTGCTCTTATCCAAACTGTCTTCAAATTAAAAAGCTGTTCTCTCATGCCAGTAGGTGCACTATTCGAGTTTCTGGAGGTTGTCCATATTGTAAGAAGGCATGGCTGGGACTAACTGTTCACTCGAGGAATTGTAGAGACACAGAATGTTGCATCCCTCGCTGCTTGGATTTGAAGAAGCATGCAGAATGGATAGCAATGCAATCTGAATCTCGCCGTAGAGCTGCAGTTGTGGAAAGCATCAGAGAACTCCGTGATCATTGA 4692 0.4009 MHAKGSSSFVPNLHQQRGFDLSQQYVRNQAGFCTDWRTPPEMRYSRYFIRNKISAILSSSIHCEQAKQSSKIANILEHRLFIHAASKEDYMNQETLVQRVQTQLNKMYRTKGTQQQVDSSINNTYKTVPSSRFLHAWSNGSLPEPALQKAAAPAINAIDYCAVNTKNKYDLPKGGLFNTSIVHEPVLSNFSVSGGGCNPEASSKSIISYFPRQHADDLEMDLKKYSCLGTIQKNESMAFHSTMGPLQSESLNLMISQHVSRENLEGSNLLPALMQPYDLCDKASTVQYMLPPDKRLEMESAFGVSLMNNASSDQWTHKMALPYSSEAPFGNSEAMLPPAKRQKMDSAFGVSLMKNASSDQWTHKMAQPYSSEAPPGNSEAMLPPDKILEMESAFCVSFMNNASSDQWTHKMAQPYSSEAPSGNSEAMLPPDKILEVESAFGVSFMNNASSDQWTHKMAQPYSSEALPELQQQSESPPIHSEVTECSAEQFTNSMLDSISIGEIKNSGIDDTFGQSFKRETIPSKGLEVDHISEEPDPKSHNMINSSNLEETVIRLNSSVHTFCKDPIAADIEDIQGKTGFNQAEINGEKKVIEPKADQEKETKTSNTAISEINGLTNCLINNSSSDQWTHKMAQPYASEALSELQQHSESPLSSIDSEVTEFNVEQFTNSMVDSMSISEIKNSAIDDTFRQNFKSETVPSEGLEAGHISEEPDPKSHDVVDRSNLEETVIGSNSNKHTLCEDPIAADIEDIQIKTGSNHAGLNAKKEVSEPKVDQEKETKSSNTTVNIVSLTDSFTSTQIMEHIKGLRKKFVQGISEEETGIAASTCQLCAMEKLFFSPVPIYCLCCGSRIKRNGNYYCKKAEEFDTQHCFCNLCYKNSRGGSITFNGLSVSKTLLDRKRNDEVLEEAWVECNKCKRWQHQICALYNKRRDLDRSAEYICPICRLKEIENGMHVPYPKTAIFGAKDLPRTMLSDHIEKRLFKRLMQERTDRAKAEANKNFDEVLAAENLTVRVVLSVDKQLKVNKQFLDIFLEENYPAEFSYRSKVILLFQQIEGADVCLFGMYVQEFGSECGYPNQRCVYISYLDSVKYFRPESKTVKGEALRTFVYHEILIGYLDFCKKRGFTTCYIWACPPLKGEDYVLYCHPDTQKTPKKDKLRHWYHSMLRKAAEENIVVGLTNIYDHFFVPTEKCDSKITAARLPYFDGDYWSGAAMDLARNIEQESGGECEKTLKLVTKRTLRAMGHVGPSKGTVKDILVMQKLGQNILPVKEDFIIIQLQHTCVHCHKVIVSGKRWFCTECKKFQECERCHTADSHTSVSGEKHILCQVFMDDIPADTRENGIILDNGLFENRNNFLSFCQKNYFQFDTLRRAKYSSMMILYHLKSPTMLTIGTMCSICCKHSVFQQSWKCEICPEFTVCSACYNERGAKSHAHKLSQTNSTALCLSGNEESKQKSVLMQELLEVLQHASQCRSTKTQPCSYPNCLQIKKLFSHASRCTIRVSGGCPYCKKAWLGLTVHSRNCRDTECCIPRCLDLKKHAEWIAMQSESRRRAAVVESIRELRDH. 1564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00799 1563 MobiDBLite consensus disorder prediction 765 779 - -
Seca9g00799 1563 SUPERFAMILY RING/U-box 1371 1433 - -
Seca9g00799 1563 MobiDBLite consensus disorder prediction 706 720 - -
Seca9g00799 1563 MobiDBLite consensus disorder prediction 762 781 - -
Seca9g00799 1563 MobiDBLite consensus disorder prediction 697 720 - -
Seca9g00799 1563 Gene3D TAZ domain 1446 1559 IPR035898 -
Seca9g00799 1563 SMART TAZ_2 1451 1532 IPR000197 -
Seca9g00799 1563 SUPERFAMILY TAZ domain 1450 1535 IPR035898 -
Seca9g00799 1563 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 961 1387 IPR031162 GO:0004402
Seca9g00799 1563 PANTHER CBP/P300-RELATED 68 1558 IPR013178 GO:0004402|GO:0006355|GO:0016573
Seca9g00799 1563 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 902 947 IPR013083 -
Seca9g00799 1563 ProSiteProfiles Zinc finger ZZ-type profile. 1276 1332 IPR000433 GO:0008270
Seca9g00799 1563 Gene3D - 1275 1322 IPR043145 -
Seca9g00799 1563 Gene3D - 1386 1440 IPR043145 -
Seca9g00799 1563 Pfam TAZ zinc finger 1457 1531 IPR000197 -
Seca9g00799 1563 ProSiteProfiles Zinc finger PHD-type profile. 869 946 IPR019787 -
Seca9g00799 1563 ProSitePatterns Zinc finger ZZ-type signature. 1394 1421 IPR000433 GO:0008270
Seca9g00799 1563 Pfam PHD-finger 906 944 IPR019787 -
Seca9g00799 1563 SUPERFAMILY FYVE/PHD zinc finger 906 946 IPR011011 -
Seca9g00799 1563 Pfam Histone acetylation protein 1005 1218 IPR013178 GO:0004402|GO:0006355|GO:0016573
Seca9g00799 1563 SUPERFAMILY RING/U-box 1256 1315 - -
Seca9g00799 1563 SMART KAT11_2 996 1288 IPR013178 GO:0004402|GO:0006355|GO:0016573
Seca9g00799 1563 ProSiteProfiles Zinc finger TAZ-type profile. 1450 1534 IPR000197 -
Seca9g00799 1563 SMART PHD_3 869 944 IPR001965 -
Seca9g00799 1563 CDD PHD_HAC_like 871 943 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00799 Seca-Chr9 15513023 15523259 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Seca9g00799 HAT_KAT11 2.9e-28 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00799 K04498 - aprc:113866525 1469.91