Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00760 ATGATAGATTATTATTGGGCTGCCCAAAAGAGAGAAGACAAGTTAATCATTCTGTCTCCAAAGTATACACACTTTGGTAAGCTTTTTGAAACATTCATTCATTTTATCTGTCTTTTTATTAGTTTGGCACTGCAACAAAATACAAAGATACAAATGCAGTTTTTTACCGAGTTGGCAACAGGATTTGTGACAAAACTTGGAGAGTCATTAGCAGCACCAATTTCAAATCAGTTTGGATATATAGTTTACTACAACAAAAATATAAAAAATCTTAAAAATGAACTCAAAACATTGGAAGGTAGGAAAGATGGGGTGCAAGGGATGGTGGATGCTGATAAAAGGAATGGACATCAAATTGTATCCAATGTTGAAGATTGGCTCTGCAATGTGGTCAAAATTGAAAATGAACTACAAGGATTCTGTGATGATCAAGTGAACAACAAATGCCTTGGTGGGTGGTGTCCAAATTTGGTGTCACGTTATTCATTGAGCAAGAGAGCAAAAAAGTTGACCACAAATGTTATTAGCTTAAAGGAAGAGAAATTTGAGATCATATCCTACCCTGCTCCTCCACCAAGACTTGGATCCACATTCTCAAATGTTTTCAAAAGCTTCCCAACTAGAAAATCAATTATGATAGAGGTCTTGGACAAACTAAAAGATGAAGATTTCAAAAGGGTAGGAATATGTGGGATGGCTGGTGTGGGGAAAACCATGTTTGTGAAAGAAGTAATCAAAATTCTAGAAGCAGATAAGTTATTTGATGAAATTGTAATGGCAGTGGTATCCCAAAATCCAGACTACAGGAAGATCCAAGGCCAAATAGCTGATGCTTTAGGCTTGAAATTTGATAAGGAGACTGTTCAAGGAAGAGCATGTCAACTACTTTATAGGTTGAAAAATATCAATAATGTCCTAATAGTGCTTGATGATGTTTGGACAGAACTTGATTTTGAGTCTATTGGGCTTCCTTCCAATGAGCATCACAATAGTTGTAAAATTTTGTTCACATCAAGAATTGAAGATGTGTGCTATAAGATGAGAAGTCAAAAGAATTGCATACTCTCTGTCTTGTCTCTAGATGAAGGATGGGATCTTTTTCATGATGTAGCAGGTGGTAATCTTGCAAACAAGCCTGATATCCATCACATAGCAAAAGAGGTTGCAAATGAATGTGGGGGGTTGCCAATTGCTATTGTGACAATAGCAAAAGCATTAGCAGATAAAGAGAAGCATACATGGGAGGATGCATTGGATCAACTAAGAAAGGCTTCAATTACATCCCTTCCAGAAATGCAAGCTTGTGTATATTCAAGTATCAATTTGAGTTACAATTTTTTAAGCAGTGAAGAAGATAAATATTTCCTTTTCCTTTGTTGCTTATTTCCAGAAGACTATGACATTCCTGTGGAAGTTCTACTCAGACATGGAGTGGGTTTGGGATTGTTTAAAGGCATTGATGCATTGTGGAAAATTAGAAACAGGGTGCATACCATTGTTGACAGATTGAAAAAACGCTTCATGTTGCTAGATAGTAATGAGGAAGAATGTGTCAAAATGCATGATGTTGTACGTGATGTTATCATATCAATTGCATCTAAAGAAGAACATGGTTTTATGGTACAATGTGATGCTCATCAAATGGAGTGGCCTAAAAATGAAACATGGGAGCATAGCAGTGCAATCTCACTTATGTTTGAAGAGACAAAGAAGCATCCTGAAGTCCTAGAGTGTCCAGAGCTTAAGCTTTTACAAATAGCATCAAAGAAAAAGGAATCAGTTCCTGAAAATTTTTTCCAAGGATTGAATAAACTCATGGTCTTTGGTCTACAAAACATGTGCATTCACTCAATGCCATCTATGTTCCAAGCTTTGGACAACATCCACACTCTAAGATTAGAAGATTGCCATGTTGGAGACATATCCATAATTGGTAAGAAACTCAGAAAACTAGAGATTCTTAGCTTTGCTAACTCAAATATCAAACAATTGCCAATAGAAATTGGACAACTAAGCTTGCTAAGATTATTGGATTTAACTGAATGCAATTATCTCATGCATGTTTCTGCTAATGTCTTTGCAAGCTTGTCAATGCTAGAAGAACTCTATCTTAGAGTAAGGAATTTCCCTTCAAAGGAGACTAATCAGATTTTCTTTGAGTTACAAACTTTATCTCATCATCTAAAGGTTGTTGAGATTGCAATTATGGCAGATGAAGCTTTGCCAAAAGATTTGGTCTTCAGAAACCTAGTGAGGTTTTGGGTTTATTTGGGAGATTCATCCACTCTTTTTCATGGCCTTGTTCGCAGGGGATACCTACACCCAAATATTCTGAAACTGAATAATGCATATTACAACTATATCAAGAAGAGTGTGACAATTCAACAGTTGCTTCAGAAAGTTGAAATTCTAAACTTATTTGATATCAAGCACTTGAAAAATGTTGTTTCAAAAATGCCATCTTTAGATGAAGGGGGTTTTCCATTCTTGAAACATCTAAGTATTGAGTCCTGCAATGATTTACATTATGTTGTGGAAGCATGTGATGATTGTGTCTTTCCACAACTTCAATCATTTTCTCTAAGTAATTTGGATAATCTAAAAGAGATATGCCATGTGCCTAATCTCATGAGTCAAAGAGTTGATTTTACAAAGGAATTCACTTCATGTCAATGCTTTGGAAGCTTAACAGATCTTAAAATAGAATACTGTTGCAAATTGAAGACCATCTTCACATTGTTTCCAAAGACAATTAATTTGGCAACACTTCAACGCTTGCATGTGGCTGAAAGCTATGGAATTGAATGCATTATCTCAATCAATACTGAACAAGCTGAGAAGTCAATGATTGAGTTTTCAAATTTAGTGGAACTGAAGCTACAAGAACTCCCAAATCTGATTGGGTTCACTAAAACCAATGTTATGCATGAGCACCATTCCTCAACAGTCCAAGAATCAACTCTTCAATCAATTGAGAAGGCAGTGATTTCAGAGGGTCAGTTGTTATCTGTGTCCAGTTTAATATCAAGTGCTGATGAACTAACTGGTTCCCTTTTTAAATCTAATTGGATGCAATTGTTCCCAAAGTTAGAAAAAATCTTATTAGATGCATGCTCTTCGTTAGATATGGTGTTTGACATGCAAGAATTACAGTTGAATAGCCAATCAGCTGCTCTATTATTTGCTCAGCTGAAAGAAATAGAGATATCTTGGCTTGGTAAGCTAAGACACATTTGGGGTAATGTTCCAAGTTACATTCAAGGCTTTCAGAATTTGAAATCAATCAAAGTTAAAAAATGTGACTCTTTAAGATATGTACTCACACTTAGCATGGCAAGAGCACTTACTCATCTTCAAAAAATGGTGATACACAGTTGCCAGTCCTTGGAGAAAATTGTTGACAAGGAAGCAAACCTAGATGGTGATGCTAGTGGTGAAAAGAATGTGGAAACCCTTGTGTTTGGTCAATTAGAATCTTTAACACTAAAGGATCTCCCATGTCTTGTGAGTGTTTGTCCAGATTCTTATGAGATAGAGTGGCCATCTTTGAGATCTTTGTGCATTGATGGATGCCCCCAGCTTAAGATTCAAACTGATGCAAAGCAAGAGAATTTCATCAATGCCTCATCAAGTGATGTTGCAAATAGCACTTCTAAATTAGAAGACTCCTCAATGTTTCTTCAATGTTGCTTTGGATGCACCCTGCATGCATTTTCCAACTTAAAGGGCAAGGCTTCATCAACAGAGAAAGGTTTCCCTTCTGCCAGTAATATAAATAACATATCAGAAATAGGATCTCCCATGCCAAATTTGAAACAACTTCAAGTAAAAGGATGGGATTCACTTGAGGTCTTATTCCTGCTTAAACAAAACCAACATTCTGATACTACAACTATCAATTGTCTAGTAAAACTGATGATGATACAGAAAGTACCAACAATTCCTGTAGGAGTCACTGCATTCAACAACCTCACACTATTAAGTTTAGATGCTTGTCACAGGTTAAGACATCTATTCTCATATTCCATAGCAAAGCTCCTTGTGAAATTACAGGAAATAAAAATATCAAACTGTAAGGTGGTAGAGCAATTAGTCCTGAGAGAAGGAGAAGAAAGCTTAACTCTGTTTCTTGCTCAATCAATTTCTCTCAAGGTACTTGAGAATTCATCTTCTAGTGATCATGCTACCATCTCCCAAGAGGCATGTGCTTTAGAGTGGCCATCCCTAAAGAGATTCAGCATTGTTAACTGCAACATGCTAGAAGTTGTTATTAGTAAAGTGGAGGAGAAAATAGATATCACTTCATTTGCTCAACTACAATCTCTTACATTAAGCCATCTACCAAATCTTGTCAGCTTCTGCCTCCTACCTTGTGCATCAAAACAACCATCCTTGGAGAACTGCCATGGGAGTAGCTATCAAAAACAAGATGAGGGAGCAAGTAATGAAGATAGAAGAAACATGGAACTTGATCCACTTATCAATGGCTTCATTTTTCCAAATCTAACATACCTAACAATAACGGGCTGCAACAAAATTCGTAGTTTGTTGTCTCCTTCAACTTCAAAAAGCCTTGTGCGTTTGGTAGAGCTAGATATATGTGGCTGTGGGGACATAGAGGAAATAGTATCTACATCTGCAGGAGGAACAAAAGGAAGTGTTAATAAGATTGTTTTCCGCTGCTTGCAGCGTCTAAAACTTGAAAATCTACCCAAGATCATGGCCTTCTGTAAGGGTTCCTATGACTTTGATTTTCCATCATTGCATCAAGTATTCCTAAAAAATTGCCACCTGATGGAGATATTCTCATACGGGTCTTCGTACACTCCAAAGTTGGATGAAGTAACCATGGAAATTGGAAATATCAACAAGAACATATGGATGGGAGATCTCAATGCTACTGCATCACTATGCAAAAGAATTTTGGCATTTCAAACATCAGAAACACTTCGATGGATCAAGCATGATCAATGCATACTGAGATACTTCACCAAAGAAAAAGAGATAACTGTTGAAGGTTTTCAAAGACTGCTAAATCTTGTTCCCTCCAATGTTATGCACATATTTCAAAATCTGAAGGAACTCACAGTAAAAAATTGTGGTTCACTGGTTGAGGTGTTTGAATCAGAAGGAGTGGATGTCAAGCAAAAGCAAGCCAGGATACACTATGAGCTAGAAGCAATGAATTTGCATTCTCTACCAAAATTGATTCACATATGGAAAAACCATGGTGAAGTTTTAGGATTCCATAAGCTAAGAATACTAAAAGTTGAGCATTGTGGCAACTTGTGTAGTTTGCTCTCTCCATCCATAGCAAGAAGCCTAGTGCAACTCTGGCACCTAAGAATATATAGTTGCCACATGATGGAGGAGATAACTACAAAGGAAGATGAGGAAAGTGAAGGATCAGAAAATAAAGCTACCATTTTATTTCCAATGTTGAACAAGCTGGAGCTTCGTTATCTTCCCAACCTCAAATGTTTCTGTTCAGGGACTTTTAATATTGAACTCCCGTCTTGTGATGAAATGATAATTGAAAAGTGCCCACAGATGACAACCTTTTGCTATGGAGCTGTAACCACACCAAAGCTTCCCCATATATACAAAGGATCATATGAATATGTGGATGTAATGGGAGACCTTAATATGACCATCTATCACACTAATGAGAATTTGAAGGTACATGCATTCTCCATATGTAAGCACAATAAAGATATGATGACCCAAAAAGAAAATATAGATATAATTTTATAG 5754 0.3664 MIDYYWAAQKREDKLIILSPKYTHFGKLFETFIHFICLFISLALQQNTKIQMQFFTELATGFVTKLGESLAAPISNQFGYIVYYNKNIKNLKNELKTLEGRKDGVQGMVDADKRNGHQIVSNVEDWLCNVVKIENELQGFCDDQVNNKCLGGWCPNLVSRYSLSKRAKKLTTNVISLKEEKFEIISYPAPPPRLGSTFSNVFKSFPTRKSIMIEVLDKLKDEDFKRVGICGMAGVGKTMFVKEVIKILEADKLFDEIVMAVVSQNPDYRKIQGQIADALGLKFDKETVQGRACQLLYRLKNINNVLIVLDDVWTELDFESIGLPSNEHHNSCKILFTSRIEDVCYKMRSQKNCILSVLSLDEGWDLFHDVAGGNLANKPDIHHIAKEVANECGGLPIAIVTIAKALADKEKHTWEDALDQLRKASITSLPEMQACVYSSINLSYNFLSSEEDKYFLFLCCLFPEDYDIPVEVLLRHGVGLGLFKGIDALWKIRNRVHTIVDRLKKRFMLLDSNEEECVKMHDVVRDVIISIASKEEHGFMVQCDAHQMEWPKNETWEHSSAISLMFEETKKHPEVLECPELKLLQIASKKKESVPENFFQGLNKLMVFGLQNMCIHSMPSMFQALDNIHTLRLEDCHVGDISIIGKKLRKLEILSFANSNIKQLPIEIGQLSLLRLLDLTECNYLMHVSANVFASLSMLEELYLRVRNFPSKETNQIFFELQTLSHHLKVVEIAIMADEALPKDLVFRNLVRFWVYLGDSSTLFHGLVRRGYLHPNILKLNNAYYNYIKKSVTIQQLLQKVEILNLFDIKHLKNVVSKMPSLDEGGFPFLKHLSIESCNDLHYVVEACDDCVFPQLQSFSLSNLDNLKEICHVPNLMSQRVDFTKEFTSCQCFGSLTDLKIEYCCKLKTIFTLFPKTINLATLQRLHVAESYGIECIISINTEQAEKSMIEFSNLVELKLQELPNLIGFTKTNVMHEHHSSTVQESTLQSIEKAVISEGQLLSVSSLISSADELTGSLFKSNWMQLFPKLEKILLDACSSLDMVFDMQELQLNSQSAALLFAQLKEIEISWLGKLRHIWGNVPSYIQGFQNLKSIKVKKCDSLRYVLTLSMARALTHLQKMVIHSCQSLEKIVDKEANLDGDASGEKNVETLVFGQLESLTLKDLPCLVSVCPDSYEIEWPSLRSLCIDGCPQLKIQTDAKQENFINASSSDVANSTSKLEDSSMFLQCCFGCTLHAFSNLKGKASSTEKGFPSASNINNISEIGSPMPNLKQLQVKGWDSLEVLFLLKQNQHSDTTTINCLVKLMMIQKVPTIPVGVTAFNNLTLLSLDACHRLRHLFSYSIAKLLVKLQEIKISNCKVVEQLVLREGEESLTLFLAQSISLKVLENSSSSDHATISQEACALEWPSLKRFSIVNCNMLEVVISKVEEKIDITSFAQLQSLTLSHLPNLVSFCLLPCASKQPSLENCHGSSYQKQDEGASNEDRRNMELDPLINGFIFPNLTYLTITGCNKIRSLLSPSTSKSLVRLVELDICGCGDIEEIVSTSAGGTKGSVNKIVFRCLQRLKLENLPKIMAFCKGSYDFDFPSLHQVFLKNCHLMEIFSYGSSYTPKLDEVTMEIGNINKNIWMGDLNATASLCKRILAFQTSETLRWIKHDQCILRYFTKEKEITVEGFQRLLNLVPSNVMHIFQNLKELTVKNCGSLVEVFESEGVDVKQKQARIHYELEAMNLHSLPKLIHIWKNHGEVLGFHKLRILKVEHCGNLCSLLSPSIARSLVQLWHLRIYSCHMMEEITTKEDEESEGSENKATILFPMLNKLELRYLPNLKCFCSGTFNIELPSCDEMIIEKCPQMTTFCYGAVTTPKLPHIYKGSYEYVDVMGDLNMTIYHTNENLKVHAFSICKHNKDMMTQKENIDIIL. 1918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00760 1917 PRINTS Disease resistance protein signature 392 406 - -
Seca9g00760 1917 PRINTS Disease resistance protein signature 226 241 - -
Seca9g00760 1917 PRINTS Disease resistance protein signature 669 685 - -
Seca9g00760 1917 PRINTS Disease resistance protein signature 299 313 - -
Seca9g00760 1917 MobiDBLite consensus disorder prediction 1463 1483 - -
Seca9g00760 1917 Gene3D Ribonuclease Inhibitor 1244 1661 IPR032675 -
Seca9g00760 1917 Gene3D - 440 530 IPR036388 -
Seca9g00760 1917 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1004 1196 - -
Seca9g00760 1917 SUPERFAMILY RNI-like 1495 1855 - -
Seca9g00760 1917 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 198 458 IPR027417 -
Seca9g00760 1917 Pfam NB-ARC domain 213 445 IPR002182 GO:0043531
Seca9g00760 1917 SUPERFAMILY L domain-like 519 1197 - -
Seca9g00760 1917 Gene3D Ribonuclease Inhibitor 553 972 IPR032675 -
Seca9g00760 1917 Gene3D Ribonuclease Inhibitor 977 1210 IPR032675 -
Seca9g00760 1917 Gene3D Ribonuclease Inhibitor 1675 1864 IPR032675 -
Seca9g00760 1917 Gene3D - 196 356 IPR027417 -
Seca9g00760 1917 Gene3D - 357 439 IPR042197 -
Seca9g00760 1917 Coils Coil 81 108 - -
Seca9g00760 1917 SUPERFAMILY RNI-like 1264 1465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00760 Seca-Chr9 14909829 14925062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00760 223 535 WRKY Transcription Factor Family AT5G45050 25.857 6.86e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00760 - - vra:106757704 2501.86