Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00753 ATGGAGATGCCAAGAGGAGAAGCTGTTCTATGTTTTGTGGCATTGTTCTGGTTTTGGAGCTCTGCAAATGCCTTGCTTTCTCCTAAGGGAATAAACTTTGAAGTGCAAGCTTTAATGGGCATAAAAGCTTCTCTAGTGGATCCTCATGGTATTCTAGATAATTGGGATGGGGATGCAGTTGATCCATGTAGCTGGAATATGGTCACATGTTCCCCTGACAACCTTGTCATTAGCCTGGGCATTCCCAGTCAAAATTTATCTGGTACTTTATCTCCAAGTATAGGAAACCTAACAAATCTTCGAACTGTTATATGTAATTTGGAGCTCTCAAGATGTATGCTTTTTATATTTATAGCTTTCATTGACACAATGGTGTTATGTTGTGGACTATTTTTTAGGGTGCTACAGAACAACAACATAACTGGACCAATCCCTTCAGAGCTGGGAAAACTTTCCAAGCTTCAAACTCTTGATCTTTCTGATAACTTCTTCAATGGGGAAATTCCTCCCTCTCTGGGTCATCTGAGAAGCCTCCAGTACTTGAGGCTCAACAATAACAGTTTTTCTGGGGAATGTCCAGAGTCACTGGCTAACATGTCACAGCTTGCTTTCCTTGACTTGTCCTTCAACAATTTGAGTGGTGCTGTACCTAAAATTTTGGCCAAATCATTCAGTATTGTTGGAAACCCTCTTGTCTGTGCTACAGGAAAAGAAACAAACTGCCGTGGGATGACACCCATCCCTATGTCCATGAACTTAAACAGTTCTGAGGATGCTTTAACATCAGGCAGACCAAAAGCTCACAAATTGGCCATTGCCTTTGGTTTGAGCCTAGGATGCCTCTGCTTATTAGTTCTTGGTTTTGGATTTTTTCTATGGAGGAGGCACAAGCATAATCAACAAACATTCTTTGATGTTAAAGACCGGCATCATGAAGAAGTTTATCTTGGAAACTTGAACAGGTTCCAATTAAGAGAACTCCAGATTGCTACTAACAACTTCAGCAACAAAAACATACTGGGAAAGGGTGGTTTTGGAAAAGTCTACAAAGGAGTTCTTCAGGATGGCACTCTTGTGGCTGTAAAAAGGCTTATAGATGGCAATGCCATTACAGGAGAGATACAATTTCAGACTGAAGTTGAAATGATCAGCTTAGCAGTGCACCGAAACCTCCTCAAACTGTATGGATTTTGTATGACACCAACAGAAAGGCTTTTAGTTTACCCTTACATGTCCAATGGCAGTGTTGCTTCTCGTCTCAAGGGTAAACCAGTCTTGGACTGGGGCACAAGAAAGCAAATTGCCTTAGGAGCAGCAAGGGGACTATTATACCTCCATGAGCAGTGTGATCCAAAGATAATCCATAGAGATGTGAAAGCTGCTAATATATTGCTTGATGACTATTGTGAGGCAGTAGTTGGAGATTTTGGGTTGGCAAAGCTTTTAGATCACCAAGATTCACATGTCACAACTGCAGTGAGGGGCACAGTAGGGCATATTGCACCAGAGTATCTTTCCACAGGACAGTCTTCTGAAAAGACTGATGTCTTTGGATTTGGCATTCTGCTTCTTGAATTGATCACAGGCCAGAGGGCTCTAGAATTTGGAAAGGCAGCCAACCAAAAAGGAGCCATGCTTGATTGGGTAAGGAAAATCCATCAGGAGAAGAAGCTTGAGTTGCTTGTTGACAAGGATCTCAAGAACAACTATGACAGGATTGAGCTTGAGGAAATGGTTCAAGTGGCACTCTTGTGTACACAATATCTTCCAGGCCATAGACCAAAAATGTCTGAAGTTGTACGTATGCTTGAAGGTGATGGATTAGCAGAGAAATGGGAAGCTTCTCAAAGTGCTGACACTAACAAGTGCAAACCACATGAGTTCTCTTCATCAGATCGGTATTCTGATCTTACTGATGACTCTTCATTGTTAGTCCAGGCCATGGAGCTTTCAGGTCCTAGGTGA 1965 0.4198 MEMPRGEAVLCFVALFWFWSSANALLSPKGINFEVQALMGIKASLVDPHGILDNWDGDAVDPCSWNMVTCSPDNLVISLGIPSQNLSGTLSPSIGNLTNLRTVICNLELSRCMLFIFIAFIDTMVLCCGLFFRVLQNNNITGPIPSELGKLSKLQTLDLSDNFFNGEIPPSLGHLRSLQYLRLNNNSFSGECPESLANMSQLAFLDLSFNNLSGAVPKILAKSFSIVGNPLVCATGKETNCRGMTPIPMSMNLNSSEDALTSGRPKAHKLAIAFGLSLGCLCLLVLGFGFFLWRRHKHNQQTFFDVKDRHHEEVYLGNLNRFQLRELQIATNNFSNKNILGKGGFGKVYKGVLQDGTLVAVKRLIDGNAITGEIQFQTEVEMISLAVHRNLLKLYGFCMTPTERLLVYPYMSNGSVASRLKGKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAANQKGAMLDWVRKIHQEKKLELLVDKDLKNNYDRIELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAEKWEASQSADTNKCKPHEFSSSDRYSDLTDDSSLLVQAMELSGPR. 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00753 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Seca9g00753 654 Gene3D Ribonuclease Inhibitor 31 243 IPR032675 -
Seca9g00753 654 SMART serkin_6 334 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00753 654 Gene3D Phosphorylase Kinase; domain 1 303 410 - -
Seca9g00753 654 Gene3D Transferase(Phosphotransferase) domain 1 411 623 - -
Seca9g00753 654 ProSiteProfiles Protein kinase domain profile. 334 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00753 654 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 128 241 - -
Seca9g00753 654 Pfam Protein kinase domain 335 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca9g00753 654 SUPERFAMILY L domain-like 34 337 - -
Seca9g00753 654 FunFam Somatic embryogenesis receptor-like kinase 1 411 623 - -
Seca9g00753 654 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Seca9g00753 654 FunFam Somatic embryogenesis receptor kinase 1 303 410 - -
Seca9g00753 654 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 15 614 - -
Seca9g00753 654 SUPERFAMILY Protein kinase-like (PK-like) 311 604 IPR011009 -
Seca9g00753 654 MobiDBLite consensus disorder prediction 614 636 - -
Seca9g00753 654 Pfam Leucine rich repeat 153 212 IPR001611 GO:0005515
Seca9g00753 654 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00753 Seca-Chr9 14823325 14827859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00753 1 654 Receptor kinase-like Gene Family AT5G16000 73.414 0.0 966
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Seca9g00753 Pkinase 2.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00753 - - gmx:100806650 1098.19