Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00747 ATGTCAATAACCTTGCTCACCAACTTGGAGCGCATTGAGACACTACTCAATGCGCCAAGCACCATTAGTGCATCCAACAAAAGATGGCACTCTACCTTCATGACCATCTATTGTTCCCGTGCCCTGATGTCACACTTCACTCTCAACAAAAACAATATTCCAGAAAAACCTTCTCTACCTTTCACTGTCATTGATTTCAATTCACACCAATCCTTCGCTATTGATCAAGCGGGTCTCACCGAGATTGTCAAAGATAAAAACGTTCAGAGCCTTCAGAGATATGGTGGGCTTGAAGGTGTGGCTTCAGCCCTTGAAACCAACGTTGAGTTTGGTATCAGAGGTGATGATGCTGAAGGAATTTCACGTAGACAACAAGTGTTTGGTTCCAACACTTACAACAAACCCCAAGCTTTTAAGGATGTCACCATTCTCATCCTTTTGGTTTGTGCAGCTCTTTCCCTTGGCTTTGGTATCAAGGAGCATGGACTCAAAGAAGGTTGGTATGATGGTGGCAGCATTTTTCTAGCTGTGTTTATTGTTATTTCCATGTCTTCTATTAGCAACTTCAGGCAGAACAGACAATTTGACAAGTTGTCTCAAGTTAGCAGTGATATACAAATTGATGTTGTGAGAAGTGGGCGTCGCCAACAAATCTCAATCTTTGAAATTGTGGTTGGTGATGTTGTTTGTTTGAAGATTGGAGATCAAGTTCCAGCTGATGGATTATTCATAGATGGACATTCATTGAGAGTGGATGAATCAAGCATGACAGGGGAGAGTGATCATGTGGAGATTAATAGGAACCATCATCCTTTTTTATTCTCTGGTACAAAGGTGGCTGATGGGTATGCTAAGATGCTTGTTACCTCAGTTGGTATGAACACAACATGGGGTGAAATGATGAGTTCAATAAGCCGTGATATTGATGAGGAAACTCCTTTGCAATCAAGGCTGAACAAGCTTACATCATCTATTGGGAAGGTTGGTTTGATTGTGGCTTTTCTTGTTCTTGTTGTTTTGTTGGTTCGTTACTTCACAGGGAACACAAAGGATGAGAATGGGGTTAAAGAGTTCAATGGGAGCAAGACTAAGTTCGATGATATCATGAATGCTGTTGTGGGAATTGTTGCTGATGCAGTTACTATTGTGGTTGTTGCAATCCCTGAGGGTCTTCCATTAGCTGTGACTCTGACCTTGGCTTATTCAATGAAGAAAATGATGGCTGATCAAGCAATGGTGAGGAAGCTCTCTGCATGTGAGACTATGGGGTCTGCTACCACTATTTGTACTGATAAAACAGGCACACTCACATTGAACCAGATGAAGGTGACCAAGTTTTGGCTTGGCCTAGAACCTGTGGTAGAGGGTGTCTACTCAATGGTTGCTCCATTTGTTCTTCAACTGATCCAGGAAGGAGTGGCTCTCAACACAACTGGTGGTGTGCACAAGTCTAATTCAGGTTCTGAATTTGAGTTTTCAGGTAGTCCCACAGAAAAAGCAATCCTATCATGGGCTGTTTTGGAATTGAACATGGATATGGAGAACTTGACAAAAAGCTGTTCTATCATTCAAGTTGAGACATTCAACTCAAAGAAGAAAAGAAGTGGGGTTTTGTTGAGAAGGAAAGCAGACAACACAGTTAATGCACACTGGAAAGGAGCAGCAGAGATGGTACTAAAGATGTGTTCAAGATACTATGATGCTTCTGGCATTGTGAAAGATCTTGACAATGATAGCAGGATGAAATTTGAAGGCATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGTATTGCTTTGGCACATGTAGAAATTGCAGGAGAAGAGGATGGAGATGAAGAAGACAACATAGTGGTAAAAGACAATGGTCTAACTCTGTTAGGACTTGTTGGTATTAAGGATCCATGTCGTCCAGGGGTGAAGAAAGCTGTAGAAGCTTGCCAACATGCTGGTGTGAATGTCAAAATGATAACAGGTGACAATGTTTTCACTGCAAAAGCTATAGCAACTGAATGCGGCATTCTTAGGCCTAATCAGGACACTGATGGAGCAGTGGTTGAAGGAGAGGAATTTCGCAACTACACACATGAAGAGAGATTAGAGAAAGTGGACAAAATCTGTGTGATGGCAAGATCCTCTCCTTTTGATAAACTTCTAATGGTTCAATGCTTGAAACAGAAAGGCCATGTAGTTGCTGTCACTGGGGATGGCACAAATGATGCACCAGCACTCAAGGAAGCTGATATAGGACTTTCTATGGGAATTCAAGGTACTGAAGTGGCTAAAGAGAGTTCAGATATTGTTATATTGGATGACAATTTTGCATCTGTAGTCACAGTCTTGAGGTGGGGAAGGTGTGTCTATAACAACATCCAGAAGTTCATTCCATTTCAGTTGACAGTGAATGTTGCTGCACTTGCAATCAACTTTGTAGCAGCAGTGTCAGCAGGGGAAGTGCCACTTACAGCAGTGCAATTATTATGGGTGAACTTGATCATGGACACATTGGGTGCTTTAGCTCTTGCAACAGAGAAACCTACCATGGACTTGATGGACAAACCACCAGTAGGTAGAACCAAACCTCTTATCACTAACATCATGTGGAGGAATCTGTTAGCTCAAGCTTTATACCAGATAGCAGTTTTGCTGACTCTTCAATTCAAAGGTGAGTCTATCTTTGGTGTGACATCAGGGGTAAATGACACATTGATTTTCAATACATTTGTTCTATGCCAAGTGTTCAATGAGTTCAATGCAAGGAAGATGGAGAAGAAGAATGTTTTCAAAGGCATTCACAGGAGCAAGCTGTTTTTGGGAATTATTGGTATGACATTAATCCTTCAGGTGGTGATGGTGGAGTTTCTCAAGAAGTTTGCTGATACAGAGAGGTTAAATTGGTGGCAATGGGCTGTTTGTATTGGCCTTGCTGCAATTTCCTGGCCAATTGGTTGGGCTGTGAAGTTGATACCTGTCCCAGATACACCATTATTCAGTTTTTTGAGTAAGATGAAGAAATGA 3018 0.4168 MSITLLTNLERIETLLNAPSTISASNKRWHSTFMTIYCSRALMSHFTLNKNNIPEKPSLPFTVIDFNSHQSFAIDQAGLTEIVKDKNVQSLQRYGGLEGVASALETNVEFGIRGDDAEGISRRQQVFGSNTYNKPQAFKDVTILILLVCAALSLGFGIKEHGLKEGWYDGGSIFLAVFIVISMSSISNFRQNRQFDKLSQVSSDIQIDVVRSGRRQQISIFEIVVGDVVCLKIGDQVPADGLFIDGHSLRVDESSMTGESDHVEINRNHHPFLFSGTKVADGYAKMLVTSVGMNTTWGEMMSSISRDIDEETPLQSRLNKLTSSIGKVGLIVAFLVLVVLLVRYFTGNTKDENGVKEFNGSKTKFDDIMNAVVGIVADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGLEPVVEGVYSMVAPFVLQLIQEGVALNTTGGVHKSNSGSEFEFSGSPTEKAILSWAVLELNMDMENLTKSCSIIQVETFNSKKKRSGVLLRRKADNTVNAHWKGAAEMVLKMCSRYYDASGIVKDLDNDSRMKFEGIIQGMAASSLRCIALAHVEIAGEEDGDEEDNIVVKDNGLTLLGLVGIKDPCRPGVKKAVEACQHAGVNVKMITGDNVFTAKAIATECGILRPNQDTDGAVVEGEEFRNYTHEERLEKVDKICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLRWGRCVYNNIQKFIPFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMDLMDKPPVGRTKPLITNIMWRNLLAQALYQIAVLLTLQFKGESIFGVTSGVNDTLIFNTFVLCQVFNEFNARKMEKKNVFKGIHRSKLFLGIIGMTLILQVVMVEFLKKFADTERLNWWQWAVCIGLAAISWPIGWAVKLIPVPDTPLFSFLSKMKK. 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00747 1005 FunFam Calcium-transporting ATPase 751 993 - -
Seca9g00747 1005 PANTHER CATION TRANSPORTING ATPASE 68 991 - -
Seca9g00747 1005 SFLD p-type atpase 411 787 IPR044492 -
Seca9g00747 1005 Gene3D - 439 635 IPR023299 GO:0000166
Seca9g00747 1005 SUPERFAMILY Calcium ATPase, transduction domain A 207 303 IPR008250 -
Seca9g00747 1005 ProSitePatterns E1-E2 ATPases phosphorylation site. 431 437 IPR018303 -
Seca9g00747 1005 NCBIfam HAD-IC family P-type ATPase 372 450 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca9g00747 1005 NCBIfam HAD-IC family P-type ATPase 707 815 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca9g00747 1005 Pfam E1-E2 ATPase 206 407 - -
Seca9g00747 1005 SUPERFAMILY Calcium ATPase, transmembrane domain M 95 991 IPR023298 -
Seca9g00747 1005 FunFam Calcium-transporting ATPase 439 635 - -
Seca9g00747 1005 PRINTS P-type cation-transporting ATPase superfamily signature 628 639 - -
Seca9g00747 1005 PRINTS P-type cation-transporting ATPase superfamily signature 734 753 - -
Seca9g00747 1005 PRINTS P-type cation-transporting ATPase superfamily signature 252 266 - -
Seca9g00747 1005 PRINTS P-type cation-transporting ATPase superfamily signature 758 770 - -
Seca9g00747 1005 PRINTS P-type cation-transporting ATPase superfamily signature 429 443 - -
Seca9g00747 1005 PRINTS P-type cation-transporting ATPase superfamily signature 650 660 - -
Seca9g00747 1005 Gene3D - 118 305 - -
Seca9g00747 1005 PRINTS H+-transporting ATPase (proton pump) signature 734 750 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca9g00747 1005 PRINTS H+-transporting ATPase (proton pump) signature 766 791 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca9g00747 1005 PRINTS H+-transporting ATPase (proton pump) signature 583 601 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Seca9g00747 1005 Pfam Cation transporting ATPase, C-terminus 819 989 IPR006068 -
Seca9g00747 1005 FunFam Calcium-transporting ATPase 177 305 - -
Seca9g00747 1005 NCBIfam calcium-translocating P-type ATPase, PMCA-type 84 991 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Seca9g00747 1005 CDD P-type_ATPase_Ca_PMCA-like 120 867 - -
Seca9g00747 1005 FunFam Calcium-transporting ATPase 629 779 - -
Seca9g00747 1005 Gene3D - 426 779 IPR023214 -
Seca9g00747 1005 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 435 640 IPR023299 GO:0000166
Seca9g00747 1005 Gene3D - 136 987 - -
Seca9g00747 1005 SFLD Haloacid Dehalogenase 411 787 - -
Seca9g00747 1005 Pfam haloacid dehalogenase-like hydrolase 426 748 - -
Seca9g00747 1005 SUPERFAMILY HAD-like 427 839 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00747 Seca-Chr9 14731043 14734090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00747 12 1005 Primary Pumps ATPases AT3G22910 68.806 0.0 1328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00747 K01537 - gmx:100793918 1695.63