Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00744 ATGGCTGAGCTAATTCCTTACAGTGTAGCAGCAAGCCTCGTTGATAGATTGGCTTTTTTTGTCGCCGGTGAATCTAAAATTATGCGTGGTACGTTGGAATCCATCAAGAATTCTATTGCAACCATCCAAGATGTGCTCCCTATTGCCGAAAAAATGCAAGAACAAAACCTTGCTGTGCAACACTGGATAAGAAGGTTAAAAGATGTACTCCATGATGCAGATGACTTGTTCGATGACATTGCTACTGAAAATTTGCGACTCAAACTTGATGGTCGTGAGAAAATTGTCAAAAAGGTATGCAATTTCTTTTCACCCTCAAGTGGAATTGTTTTTCGTCGTCAAATGAATAACAAAATAAAGAAGATACTAAAAGATGTTGACTCTGTAGCGAGTCTTATGTCTAGATCATTGAACTTAGATATGGATCATTTGAATATAATCCAATCACGTGAGAGGAAAACAAGTTCTGTGGTGTTAGAATCAGTTATCATTGGAAGAGAACATGATAAGAGAGAGATTCTAAGGCTGTTGTTGGAACCGCTTGGAAACGAAAATGTTTCCTTGATTGGTATTGTTGGTATCGGTGGTATAGGCAAGACAACTGTTGCCCAAATGGTATACAATGATACTGAAGTCAAACGGCACTTTGAAATGCAAATGTGGGTGTGTGTTTCTGATAACTTTGATGTCAAGAAGGAAATATTAGAACTATTGAAGATTGGTAGTGGAGGCAATGACCGAGACACAATGGAAGTCTTAAATGGCAGGAAGTATTTGTTAGTGTTGGATGATATGTGGAACGAAAATCGTGAAAGATGGGATCATTTGACAAGTTTTTTGATGCGTGGGGCTCCAGGTAGTAGGATTTTAATAACAACTCGTAGTGAAAATGTAGCCAAAGTAATGGGAGCTAGCTTTTTATTTCATTTGAAAGGCTTGAGTGAAGAATATTCTTGGAGTTTAGTATTTAAAGATTATGAATCTGTAATGTACCATAAACTAGAATCAGTTGGTAGAGAAATTGTAAGAAAGTGTGGAGGAGTTCCACTAGCAATTAAAATAGCGGCAGACGCATTACGATCTAAACATGCAGAAGTAGATTGGATTGTATATTTAGAACATATGAATGAAGACAGATCAGATACTGATATCCTACCTGTTCTAAAACTCAGTTATCAATTTTTGTCACCTGAATTGAAACAGTGCTTTGCTTATTGTTGCATATATCCCAAAGGATGGGAAATTGAAAAGAATGAATTGATTCAATTATGGATGGCGCAAGGTTATCTTGGTGAGCACCAAATGGAAGATGTGGGTGATGAATTTGTTGAGACTCTTATTAAGATGTCAATGTTTCAAGATGCAAAAATTGATGAATATGGTAACCTAGTTAGTGTGAAAATGCATGATTTGATACATGATCTTGCATTGCATGTAGCTGGCGATGATTATTACTTGGATAGTCGGAGACTGAGAGAAGTCAACGAACCCATGCACATGTGCATCTCATATGAATCTAACACCATGGATTCATTGGGTTCAATAGAAGCAGGTAGGCTGCGAACATTTTTTCTGCGGCAGTCAAATGATGAGGAGGAGAGTGGTCACACTCAGTTGATGAGAGAATTGCCTGTTGTTTTAAGATTCAAGCGCTTACGCGTCTTGAATCTGTCCCGTTCTTCTTTAAAGACGTTGTCAAATTCAATTGAAAAATTGACACATTTAAGATATCTTGACTTATCTTGGTGTGTAGAACTAGTAAGTCTTCCGAAATCCATAGGCAATCTTGTTAACTTGCAGACATTGAAATTGACTGGTTGTGAGGCACTCGAATTTTCTACCCAAGTTGTCACAAAGTTAATCAGTTTGAGGCACCTTGAGATTCATAGTTGCAAAGCCTTTGAGGACATGATGCCAGCTGGACTGGGGAAGTTGTCTTCATTGCAATCCTTATCAAGCTTTTACGTGGTGGATGCAGCAGATCAGAAGAAGAAGAAAGCTGGCCAACTGAATGAATTACAGAACTTAAATAATCTGAGGGGAAATTTAAAGATTAACGCACTTGGTCTGATAAGAAACGTGATGTCGGAATCAAAGGAAGTAAACTTGAAAGAGAAGAAACTCCTTGAGTCCTTGAATTTAAATTGGGGGCATGGGGACGTTAACAGGGACGGCAGCGAACAACTATTAAGAAACCTTCGTCCGCACCAAAATCTAAAAAGATTGACCATTTGGTGGTATCCGGGTTCGAGGTTCCCTAATTGGTTTTCTTCAATCATAAATCTTTCTTACATTGCTCTCTTTGGCTTTGATGATTGCAAATATCTCCCACCATTACATCAACTGCCATGCCTCAAGTCTCTTGAGATAGGTTCTATGAAAGCATTGGAGTGCATATCTTATGGGATGGGGTCGGTAACATTCTTCCCATCTTTGCAGAGGCTCAAGTTAAGCCGCTGTGAGAAACTCCACCGATGGGGGTGGATGGAAGAGGCTTATACTTTTCCTTGTCTCTCTCAATTAATAATAAACAAGTGCCCAAGGTTGACTCGCATACCTACTTTTCCAGATGTTGAGGAATTGCAATTGTGTGAATCTACAGTGGAGCCATTGAAAAAAACGCTGCACACACGGTCCTCCTCCTTCTCCACTCCTTTTTCCAAGCTCAAGTCGCTAAAGATAGAAGGAAAACTTCCGGGTGTAGAAGATTTACGATCTCAGTTGATACCAAACCTTACTTCTCTCCAGTATCTTGAAATTGGAGATGTTGATAAGTTAGCAATTTGGTTTGAGTACAGCCTCCCTTCTCTGCACAAAATTGTGATATATAACTGTGACTTACAAGCTTTGCCCGATGGGATGTGTAACTCGCAGTCACTTGAGCATATCAAGATCATGGGATGCCGTTATTTGTCGTCCTTGCCAAAAGGAATGGCTGGCCTTACCAAATTACTCACACTGGAAATCTGGGGTTGTCCCCTCTTAGTTGAACGATGCCAGACGGGAACAGGAGCAGATTGGCCCAAAGTTTCTCATGTGCAAAACATAATTTTGGTGTAA 3060 0.3951 MAELIPYSVAASLVDRLAFFVAGESKIMRGTLESIKNSIATIQDVLPIAEKMQEQNLAVQHWIRRLKDVLHDADDLFDDIATENLRLKLDGREKIVKKVCNFFSPSSGIVFRRQMNNKIKKILKDVDSVASLMSRSLNLDMDHLNIIQSRERKTSSVVLESVIIGREHDKREILRLLLEPLGNENVSLIGIVGIGGIGKTTVAQMVYNDTEVKRHFEMQMWVCVSDNFDVKKEILELLKIGSGGNDRDTMEVLNGRKYLLVLDDMWNENRERWDHLTSFLMRGAPGSRILITTRSENVAKVMGASFLFHLKGLSEEYSWSLVFKDYESVMYHKLESVGREIVRKCGGVPLAIKIAADALRSKHAEVDWIVYLEHMNEDRSDTDILPVLKLSYQFLSPELKQCFAYCCIYPKGWEIEKNELIQLWMAQGYLGEHQMEDVGDEFVETLIKMSMFQDAKIDEYGNLVSVKMHDLIHDLALHVAGDDYYLDSRRLREVNEPMHMCISYESNTMDSLGSIEAGRLRTFFLRQSNDEEESGHTQLMRELPVVLRFKRLRVLNLSRSSLKTLSNSIEKLTHLRYLDLSWCVELVSLPKSIGNLVNLQTLKLTGCEALEFSTQVVTKLISLRHLEIHSCKAFEDMMPAGLGKLSSLQSLSSFYVVDAADQKKKKAGQLNELQNLNNLRGNLKINALGLIRNVMSESKEVNLKEKKLLESLNLNWGHGDVNRDGSEQLLRNLRPHQNLKRLTIWWYPGSRFPNWFSSIINLSYIALFGFDDCKYLPPLHQLPCLKSLEIGSMKALECISYGMGSVTFFPSLQRLKLSRCEKLHRWGWMEEAYTFPCLSQLIINKCPRLTRIPTFPDVEELQLCESTVEPLKKTLHTRSSSFSTPFSKLKSLKIEGKLPGVEDLRSQLIPNLTSLQYLEIGDVDKLAIWFEYSLPSLHKIVIYNCDLQALPDGMCNSQSLEHIKIMGCRYLSSLPKGMAGLTKLLTLEIWGCPLLVERCQTGTGADWPKVSHVQNIILV. 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00744 1019 Gene3D - 10 135 - -
Seca9g00744 1019 Gene3D Ribonuclease Inhibitor 665 877 IPR032675 -
Seca9g00744 1019 FunFam Probable disease resistance protein At1g63360 392 478 - -
Seca9g00744 1019 Gene3D - 392 478 IPR036388 -
Seca9g00744 1019 PRINTS Disease resistance protein signature 252 266 - -
Seca9g00744 1019 PRINTS Disease resistance protein signature 188 203 - -
Seca9g00744 1019 PRINTS Disease resistance protein signature 345 359 - -
Seca9g00744 1019 PRINTS Disease resistance protein signature 570 586 - -
Seca9g00744 1019 Gene3D - 312 391 IPR042197 -
Seca9g00744 1019 FunFam Probable disease resistance protein At1g61300 147 305 - -
Seca9g00744 1019 Gene3D Ribonuclease Inhibitor 878 1014 IPR032675 -
Seca9g00744 1019 PANTHER DISEASE RESISTANCE PROTEIN RP 46 846 IPR044974 GO:0006952
Seca9g00744 1019 Gene3D Ribonuclease Inhibitor 507 656 IPR032675 -
Seca9g00744 1019 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 406 IPR027417 -
Seca9g00744 1019 Coils Coil 659 679 - -
Seca9g00744 1019 Gene3D - 144 306 IPR027417 -
Seca9g00744 1019 SUPERFAMILY L domain-like 452 1011 - -
Seca9g00744 1019 Pfam NB-ARC domain 167 380 IPR002182 GO:0043531
Seca9g00744 1019 Pfam Rx N-terminal domain 12 93 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00744 Seca-Chr9 14715802 14719026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00744 185 639 WRKY Transcription Factor Family AT5G45050 21.846 6.39e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00744 - - mtr:25495499 983.015