Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00740 ATGCAGACCAGGGAGGTTACAGGACTCAATTACATGCTCCCTTCAAACCCACCTCCTTATCCAGCTAACTACAACATGATTCAGAACAACATTCCCACATTTCAATTCCAAAGATTCTCTAACCAATTATATGGTTTCCAGAACCCCCTTCCTCCTCAAGTTCCTGACTTTAGTCCTCAATCATCATGTATCAGCAGCAATTCAACTTCTGATGAAGCTGATGAGCAACAACTATGTCTCATCAATGAGAGGAAACACAGAAGGATGATATCAAACAGAGAATCAGCACGTAGATCACGCATGAGGAAGCAGAAGCACCTTGATGAGCTTTGGTCACAAGTTGTTTGGCTAAGGAATGAGAATCACCAGCTAATAGACAAATTGAACCATGTGTCAGAGAGCCATGATCAAGTCCTTCAAGAGAATGCTCAGCTGAAAGAGGAAGCTTCAGAGCTTCGCCAAATGCTAAGAGACATGCAAATACACAGTCCCTGCCCTTCCTTTAGCCCCTTGGAAGATGTTCCTTGCAGTTCAGCATATCTCAGATCTGATTCTTCAAACCAATCCATCTCAAGTTCCATGGACCTGCTTGGCTGA 597 0.4355 MQTREVTGLNYMLPSNPPPYPANYNMIQNNIPTFQFQRFSNQLYGFQNPLPPQVPDFSPQSSCISSNSTSDEADEQQLCLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIDKLNHVSESHDQVLQENAQLKEEASELRQMLRDMQIHSPCPSFSPLEDVPCSSAYLRSDSSNQSISSSMDLLG. 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00740 198 Coils Coil 128 162 - -
Seca9g00740 198 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 168 IPR044521 -
Seca9g00740 198 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Seca9g00740 198 SUPERFAMILY Leucine zipper domain 84 134 IPR046347 GO:0003700|GO:0006355
Seca9g00740 198 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Seca9g00740 198 Gene3D - 82 138 - -
Seca9g00740 198 FunFam BZIP transcription factor 82 133 - -
Seca9g00740 198 Pfam bZIP transcription factor 84 142 IPR004827 GO:0003700|GO:0006355
Seca9g00740 198 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Seca9g00740 198 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00740 Seca-Chr9 14598095 14598691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00740 19 168 bZIP Transcription Factor Family AT3G30530 64.052 1.44e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca9g00740 bZIP_1 3.1e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00740 - - aprc:113867865 303.908