Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00736 ATGACGATTGGAAGTCTTGCACCTAAGGCAGAGAGGACAAGATCAAGGAAGAACAAGTCAGTTGTTGATGAGAATGCGCCTTTGATTCCTAAGACTCAGGAGACTGATGCTGGGTTTGATGATTTTAATGGAGCTTCATTTTCTGGGGCTGTTTTCAACTTGTCCACCACAATTATTGGTGCTGGGATCATGGGCTTGCCTGCATGTGTGAAAAAGTTGGGGATGGTGCCTGGTCTTCTTATTATAATCTTTACAGCATTCTTGACAGAGAAGTCAATTGAGTTCATGATTAGGTTTTCCAGGGCTGGAAATCTTTCTTCTTATGGAAGTCTCATGGGGGATGCCTTTGGAAAATATGGAAAAGCTCTGTTGGAGATATGTGTTGTAATCAATAACATTGGTGTGCTGATTATTTACATGATCATTATTGGTGATGTGATTTCTGGAACATCTTCTAGTGGAATTCATCACTCTGGTGTCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTGGGCGTACATTTGTTCTTGTTGTTATAACATTTGCTGTATTTGCACCTTTGGTCAGCTTTAAGCGAATTGATTCATTGAGATTCACATCTGCATTATCAGTTGGACTAGCAGTTGTTTTTCTTGTCATTGCTGTGGGAATCTCAATTGTCAAGATTATAAGTGGAGGCATTGAGATGCCCAGACTCTTCCCGATCATTACTGATGCAGTGTCAGTTTTTGAATTGTTCACTGTGGTTCCTGTGCTTGTGACCGCCTATATCTGCCACTACAATGGTATGAAAAATTTTCAAACGTTTGTTGCAGTTCACAGCATAGATAATGAACTTGAGGACTCTTCATGGATGCATGGGGTTGTACGTACCTCCCTTGCTCTGTGCTCTTCAGTCTACTTACTGACAAGCTTCTTTGGGTTCCTCCTATTTGGTGAAGAAACTCTTGATGACGTGCTTGCCAATTTTGATACTGATCTTGGAATTCCTTTTGGTTCTGTGCTTAATGATGCTGTTCGTTTTAGCTATGCTGCACATCTTGTGCTTGTATTTCCAGTAGTCTTCTATGCAGTGAGGGTCAACATAGATAGCCTCATATTTTCTTCATCAAGGCCTTTGGCTCTAGACAACTTCAGATTTGCATCAATTACTATTGCCCTTGTTGGTATTATCTTCCTGGGAGCAAATTTCATTCCAAGCATTTGGGATATTTTCCAGTTCACTGGAGCAACAGCTGCTGTTTGTGTAGGATTCATATTTCCAGCTGCCATCACTCTTAGGGACCGGTACAACATAGCAACTAAAAGAGACAAGATTCTATCTGTCTTTATGATAGTCCTGGCAGTGTTGTCAAATGCTGTGGCTATATACAGTGATGCCTATGCCTTGATCAAGAAGAATAAAACTTAA 1413 0.4091 MTIGSLAPKAERTRSRKNKSVVDENAPLIPKTQETDAGFDDFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMVPGLLIIIFTAFLTEKSIEFMIRFSRAGNLSSYGSLMGDAFGKYGKALLEICVVINNIGVLIIYMIIIGDVISGTSSSGIHHSGVLEGWFGVHWWTGRTFVLVVITFAVFAPLVSFKRIDSLRFTSALSVGLAVVFLVIAVGISIVKIISGGIEMPRLFPIITDAVSVFELFTVVPVLVTAYICHYNGMKNFQTFVAVHSIDNELEDSSWMHGVVRTSLALCSSVYLLTSFFGFLLFGEETLDDVLANFDTDLGIPFGSVLNDAVRFSYAAHLVLVFPVVFYAVRVNIDSLIFSSSRPLALDNFRFASITIALVGIIFLGANFIPSIWDIFQFTGATAAVCVGFIFPAAITLRDRYNIATKRDKILSVFMIVLAVLSNAVAIYSDAYALIKKNKT. 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00736 470 Pfam Transmembrane amino acid transporter protein 45 457 IPR013057 -
Seca9g00736 470 PANTHER AMINO ACID TRANSPORTER 43 452 - -
Seca9g00736 470 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00736 Seca-Chr9 14526815 14530156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00736 3 468 Amino Acid or Auxin Permease AAAP Family AT3G30390 64.807 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00736 K14207 - gmx:100791286 746.888