Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca9g00709 ATGATGTTCCGTTTCATGCCCATGATTCGATCCTTCCTCATACCCTGTCCATGCATTCTGCTTTTGTTTCTGCTGTCATGCACTTGCTTCCCTTCAACAGAAGCTTATGATCCACTTGATCCAAATGGAAATATCACAATCAAATGGGATATTATAAGCTGGACAGCTGATGGTTATGTTGCTGTTGTTACAATGAACAATTTCCAACAATATCGTCATATCTCAGCACCTGGGTGGTCACTAGGATGGACATGGGCAAAGAAGGAGGTAATATGGAGCATGATGGGAGGGCAGACCACAGAACAAGGGGATTGTTCAAAATTTAAGGGAAACATCCCACATTGCTGTAAAAAGGATCCAACAGTTGTAGATTTACTTCCCGGAACACCTTACAATCAACAAATTGCAAATTGCTGCAAAGGTGGTGTACTCAGCTCATGGGCACAGGATCCAACCAATGCAGTTGCAGCATTTCAAGTCAGTGTGGGTAGAGCTGGTACCACTAACAAAACTGTCAGAGTGCCAAAAAACTTCACCTTGAAAGCACCAGGACCAGGTTATACATGCGGGCCAGCAAAAATTGTGAAACCCACTCGTTTCATACAACCAGACAAAAGGAGAGTGACTCAAGCACTCATGACATGGAATGTGACATGTACATATTCACAATTTCTAGCTCAGAAAACCCCTACTTGCTGTGTCTCCCTTTCATCTTTCTATAATGATACTGTTGTACCATGCCCAACATGTGCGTGTGGCTGCCAGGGCAACTCATCTCAATCAGGGAACTGTGTAGATCCAGATTCACCACATTTGGCATCAGTTGTTTCCAACACTGATAAGAATAGTATTACACCTTTGGTTCGATGCACTAATCATATGTGCCCAATCCGAGTTCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGTGTGAAGGTCACTATTACTAATTTCAATTACAGGATGAATTATTCTGATTGGAACCTGGTTGTCCAACACCCAAACTTTGACAATCTGACCCAAATTTTCAGTTTCAACTACGGGGCATTAACTCCCTACGGGTCAATAAATGATACAGCAATGCTGTGGGGGATTAAGTTCTACAATGATTTACTCATGCAAGCTGGCCCTCTTGGTAATGCACAATCAGAGCTACTTTTCCGAAAGGAAAAGGCAACATTTACTTTTGATAAGGGTTGGGCTTTTCCTCGGAGGATATATTTCAATGGTGACAACTGTGTGATGCCACCACCTGATGCTTATCCATGGTTACCTAATGCTGGTTCCAAGCAACAGGTTTCCCTGCTTGCTTTGATAATGACTTCCTTGGTAACCTTGGTATTTTATTCATATGCTTGA 1365 0.4256 MMFRFMPMIRSFLIPCPCILLLFLLSCTCFPSTEAYDPLDPNGNITIKWDIISWTADGYVAVVTMNNFQQYRHISAPGWSLGWTWAKKEVIWSMMGGQTTEQGDCSKFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVLSSWAQDPTNAVAAFQVSVGRAGTTNKTVRVPKNFTLKAPGPGYTCGPAKIVKPTRFIQPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTVVPCPTCACGCQGNSSQSGNCVDPDSPHLASVVSNTDKNSITPLVRCTNHMCPIRVHWHVKLNYKEYWRVKVTITNFNYRMNYSDWNLVVQHPNFDNLTQIFSFNYGALTPYGSINDTAMLWGIKFYNDLLMQAGPLGNAQSELLFRKEKATFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSKQQVSLLALIMTSLVTLVFYSYA. 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca9g00709 454 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Seca9g00709 454 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0016020
Seca9g00709 454 PIRSF COBRA 8 454 IPR006918 GO:0010215|GO:0016020
Seca9g00709 454 PANTHER PROTEIN COBRA 24 444 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca9g00709 Seca-Chr9 13984735 13988985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca9g00709 19 450 COBRA Gene Family AT3G02210 78.291 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca9g00709 - - gmx:100783820 841.647